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Report for CCDS37120.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37120.1 Public Mus musculus 15 Gpaa1 23 108 98 CCDS HistoryNCBI Gene:14731Re-query CCDS DB by CCDS ID:37120.1Re-query CCDS DB by GeneID:14731See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 37120.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000023221.12 ENSMUSP00000023221.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000023221.12Link to Ensembl Protein Viewer:ENSMUSP00000023221.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000023221Re-query CCDS DB by Protein ID:ENSMUSP00000023221
Original member Current member NCBI NM_010331.2 NP_034461.1 Accepted alive Link to Nucleotide Sequence:NM_010331.2Link to Protein Sequence:NP_034461.1Re-query CCDS DB by Nucleotide ID:NM_010331Re-query CCDS DB by Protein ID:NP_034461Link to BLAST:NP_034461.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034461.1 621 Q9WTK3 621 100% 0 0

Chromosomal Locations for CCDS 37120.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 76331390 76331463 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76331896 76332075 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76332160 76332271 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76332484 76332631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76332710 76332811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76332903 76333099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76333177 76333373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76333464 76333617 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76333795 76333890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76334014 76334204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76334290 76334460 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76334582 76334825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1866 nt):
ATGGGTCTCCTGTCGGACCCGGTGCGCCGGCGCGCGCTCGCCCGCATCGTCTTGCGCCTTAACACACCTC
TCTGTGTGCTGAGCTACGTGGCCGGGATCGCCTGGTTTCTGGCGCTGGCTTTTCCGCCGTTAACCCAGCG
CACTTACATGTCTGAGAATGCCATGGGCTCCACCATGGTGGAGGAACAGTTTGTAGGTGGAGACCGCGCT
CGGAGCTTTGCCCGGGACTTCGCTGCCCACCGCAAGAAGCCGGGGGCTCTGCCAGTAGCCTGGCTGGAAC
GGTCCATGCGATCCGTAGGGCTGGAGGTCTACACCCAGAGCTTCTCCCGCAAACTACCCTTCCCGGATGA
GACCCACGAGCGCTATATGGTGTCAGGTACCAACGTGTATGGCATCCTGCGGGCCCCACGTTCTGCCAGT
ACCGAGTCCCTGGTGCTTACTGTACCCTGTGGTCCAGATGCCACCAATAGCCAGGCTGTGGGGTTGTTGT
TGGCACTTGCTGCCCATTTCCGAGGGCAGATTTACTGGGCCAAAGATATCATTTTCCTGGTAACAGACCA
TGATCTTCTGGGCACCGAGGCTTGGCTCGAAGCCTACCATGACATTAATGTTACAGGCATACAGTCATCT
CCCCTGCAGGGCAGGGCTGGAGCCATCCAGGCTGCTGTAGCTCTGGAGCTGAGCAGCGACGTGGTCACCA
GCCTCGATGTGACAGTGGAGGGACTCAACGGTCAGCTGCCCAACCTTGATCTGCTCAACCTCTTCCAGAC
CTTCTGCCAGAAAGGGGGGCTGTTGTGTACACTCCAGGGCAAGCTGCAGCCCCAGGACTGGACGTCACTC
GAAGGGCCGTTGCAGGGTTTGCAGACACTGCTACTCATGGTGCTGCGGCAGGCCTCTGGCCGGCCCCACG
GCCCCCACGGCCTTTTTCTGCGCTACGGAGTGGAGGCACTAACCCTACGCGGCATCAATAGCTTCCGCCA
ATACAAGTATGATTTGGCGACAGTGGGCAAGGCTCTGGAGGGCATGTTCCGCAAGCTCAACCACCTCCTG
GAGCGCCTGCACCAGTCATTCTTCTTCTACCTGCTGCCGGCCCTCTCCCGCTTTGTCTCCATCGGACTCT
ACATGCCCGCCACGGGCTTCCTGCTCCTAGTCCTTGGACTCAAGGCTCTGGAGCTGTGGATGCAGTTACA
CCAGGCTGGAGTCAACCCGGAGGAGGCTGGGAAGGCCCCTAGTCCCGGGACTCCACTCTTGCCAACACAG
GGTGTGGGCCTGGCCTCACTTACGGCACCCCTGCTGATCTCTCAGGCCATGGGTCTGGCCCTCTATTTCC
TGCCTGTGCTGGGCCAACATTTAGCTACTCAGCATTTCCCAGTGGCCGAAGCCGAGGCTGTTGTGTTGAC
GCTGCTCGCGATTTATGTAGCCGGCCTGGCCCTTCCACACAACACCCACCGAGTGGTCAACTCACAGGTC
CCAGACAGGGGCTGGATGGCACTGAAACTAGTGGCCCTCATCTACCTGGCACTGCAGCTGGGTTGCATTG
CTCTCCTCAATTTCTCCCTGGGCTTCCTGCTGGCTGCCACCATGGTCCCTGCTGCTGCACTCGCCAAGCC
CCATGGGCCCCGGACACTGTATGCTGCCCTGCTGGTAGTGACCAGCCCAGCAGTCACACTCTTCGGTAGC
CTGTTCCTGTGGCGGGAGCTGCTGGAGGTACCGCTGTCTCTGGCAGAGGGTTGGCAGCTCTTCCTCACAG
CATTGGCCCAGGGTGTGCTGGAACACTACACCTATGGCGCCCTCCTCTTCCCAATACTGGCCTTGGGTCT
GTATCCTTGCTGGCTGCTTTTCTGGAATGTCCTCTTCTGGAAGTGA

Translation (621 aa):
MGLLSDPVRRRALARIVLRLNTPLCVLSYVAGIAWFLALAFPPLTQRTYMSENAMGSTMVEEQFVGGDRA
RSFARDFAAHRKKPGALPVAWLERSMRSVGLEVYTQSFSRKLPFPDETHERYMVSGTNVYGILRAPRSAS
TESLVLTVPCGPDATNSQAVGLLLALAAHFRGQIYWAKDIIFLVTDHDLLGTEAWLEAYHDINVTGIQSS
PLQGRAGAIQAAVALELSSDVVTSLDVTVEGLNGQLPNLDLLNLFQTFCQKGGLLCTLQGKLQPQDWTSL
EGPLQGLQTLLLMVLRQASGRPHGPHGLFLRYGVEALTLRGINSFRQYKYDLATVGKALEGMFRKLNHLL
ERLHQSFFFYLLPALSRFVSIGLYMPATGFLLLVLGLKALELWMQLHQAGVNPEEAGKAPSPGTPLLPTQ
GVGLASLTAPLLISQAMGLALYFLPVLGQHLATQHFPVAEAEAVVLTLLAIYVAGLALPHNTHRVVNSQV
PDRGWMALKLVALIYLALQLGCIALLNFSLGFLLAATMVPAAALAKPHGPRTLYAALLVVTSPAVTLFGS
LFLWRELLEVPLSLAEGWQLFLTALAQGVLEHYTYGALLFPILALGLYPCWLLFWNVLFWK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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