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Report for CCDS37139.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37139.1 Public Mus musculus 15 Ankrd54 23 108 98 CCDS HistoryNCBI Gene:223690Re-query CCDS DB by CCDS ID:37139.1Re-query CCDS DB by GeneID:223690See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37139.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000040676.10 ENSMUSP00000047042.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000040676.10Link to Ensembl Protein Viewer:ENSMUSP00000047042.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000040676Re-query CCDS DB by Protein ID:ENSMUSP00000047042
Original member Current member NCBI NM_144849.1 NP_659098.1 Accepted alive Link to Nucleotide Sequence:NM_144849.1Link to Protein Sequence:NP_659098.1Re-query CCDS DB by Nucleotide ID:NM_144849Re-query CCDS DB by Protein ID:NP_659098Link to BLAST:NP_659098.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_659098.1 299 Q91WK7 299 100% 0 0

Chromosomal Locations for CCDS 37139.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 79054010 79054084 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 79054496 79054603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 79055292 79055416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 79055495 79055542 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 79056014 79056085 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 79057955 79058053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 79061164 79061211 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 79062473 79062797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (900 nt):
ATGGCAGCCACCGGCGGGGGCGCGGACGACGAGTCGCGATCCGGCCGCTCGAGCTCGGACGGCGAGTGCG
CGGTGGCGCCGGAGCCTTTGGCGGAAGCCGGAGGCCTGGTGTCTTTCGCGGACTTCGGCGTTTCGCTGGG
CAGCGGCGCCGGCCTCCCGGGCCGGTCGGTGGGCAGGGCCCAGTCCTCGCTGCGCTACCTCCAGGTCCTG
TGGCAGCAGGACGTCGAGCCTCGCGACGAACTGCGTTGCAAGATTCCCGCCGGGCGGTTGAGGCGTGCCG
CCAGGCCCCACCGTCGGCTCGGGCCCACCGGCAAGGAGGTACACGCTCTGAAGAGGCTGAGGGACTCTGC
CAATGCCAACGACGTAGAAACAGTGCAGCAGCTGCTGGAAGATGGGGCGGATCCCTGCGCAGCGGATGAT
AAAGGCAGAACTGCCCTCCATTTTGCTTCCTGCAATGGCAATGACCAGATTGTGCAGCTGCTCCTGGACC
ATGGGGCTGACCCCAACCAACAGGATGGTCTGGGCAACACGCCATTGCACCTGGCGGCCTGCACCAACCA
TGTTCCTGTCATCACCACACTGCTTCGAGGAGGGGCCCGTGTAGATGCCCTAGACAGAGCTGGCCGCACA
CCCCTACACCTGGCCAAGTCGAAGCTGAACATCCTACAGGAGGGTCATTCCCAGTGTCTGGAGGCCGTCC
GCCTGGAGGTGAAGCAGATCATCCACATGCTACGCGAGTACCTGGAGCGCCTGGGGCGGCATGAGCAGCG
AGAACGGCTAGATGACCTCTGCACCCGCCTCCAGATGACAAGTACCAAAGAACAGGTGGATGAAGTGACG
GACCTCTTGGCCAGCTTCACCTCCCTCAGTCTGCAGATGCAGAGTATGGAGAAGAGGTAG

Translation (299 aa):
MAATGGGADDESRSGRSSSDGECAVAPEPLAEAGGLVSFADFGVSLGSGAGLPGRSVGRAQSSLRYLQVL
WQQDVEPRDELRCKIPAGRLRRAARPHRRLGPTGKEVHALKRLRDSANANDVETVQQLLEDGADPCAADD
KGRTALHFASCNGNDQIVQLLLDHGADPNQQDGLGNTPLHLAACTNHVPVITTLLRGGARVDALDRAGRT
PLHLAKSKLNILQEGHSQCLEAVRLEVKQIIHMLREYLERLGRHEQRERLDDLCTRLQMTSTKEQVDEVT
DLLASFTSLSLQMQSMEKR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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