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Report for CCDS37400.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37400.1 Public Mus musculus 16 Son 23 108 98 CCDS HistoryNCBI Gene:20658Re-query CCDS DB by CCDS ID:37400.1Re-query CCDS DB by GeneID:20658See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37400.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000114036.8 ENSMUSP00000109670.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000114036.8Link to Ensembl Protein Viewer:ENSMUSP00000109670.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000114036Re-query CCDS DB by Protein ID:ENSMUSP00000109670
Original member Current member NCBI NM_019973.2 NP_064357.2 Accepted alive Link to Nucleotide Sequence:NM_019973.2Link to Protein Sequence:NP_064357.2Re-query CCDS DB by Nucleotide ID:NM_019973Re-query CCDS DB by Protein ID:NP_064357Link to BLAST:NP_064357.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_064357.2 2126 Q9QX47-2 2126 100% 0 0

Chromosomal Locations for CCDS 37400.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 16 (NC_000082.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 91647908 91647984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 91651630 91651796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 91654611 91660580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 91662101 91662261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 91662492 91662497 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (6381 nt):
ATGGCGGCCGACATCGAGCAGGTTTTCAGGTCTTTCGTGGTCAGTAAATTCCGGGAAATACAACAGGAGC
TTTCCAGTGGAAGGAGTGAAGGCCAGCTGAATGGTGAAACAAATCCACCCATTGAAGGGAACCAGGCAGG
TGACACAGCTGCCTCTGCAAGGAGTCTCCCAAATGAAGAAATAGTGCAGAAGATAGAGGAGGTCCTCTCT
GGGGTCTTAGATACGGAGCTGCGGTACAAGCCCGACTTGAAAGAGGCCTCCAGAAAAAGTAGATGCGTAT
CTGTGCAAACAGATCCTACTGATGAAGTGCCCACCAAAAAGTCAAAGAAGCATAAAAAGCACAAAAACAA
AAAGAAGAAAAAGAAGAAAGAAAAAGAAAAAAAATATAAAAGACAACCAGAAGAATCTGAGTCCAAGCTG
AAATCTCATCATGATGGGAATCTAGAATCTGATTCCTTCTTAAAGTTTGATTCTGAACCTTCAGCAGCGG
CACTGGAACATCCTGTAAGAGCGTTTGGCTTATCTGAGGCCAGTGAGACCGCCTTAGTGCTGGAACCTCC
AGTAGTCTCAATGGAGGTTCAGGAGTCACACGTTCTAGAGACTCTGAAGCCAGCTACAAAAGCTGCAGAA
CTGTCAGTTGTGTCTACATCAGTAATCTCAGAGCAGTCTGAGCAGCCTATGCCAGGTATGCTGGAACCAT
CAATGACAAAGATCCTGGATTCCTTCACAGCAGCACCAGTGCCTATGTCAACAGCGGCGCTGAAGTCACC
TGAGCCCGTTGTAACAATGTCAGTGGAATATCAGAAGTCTGTGCTGAAATCTTTGGAGACTATGCCTCCA
GAGACGTCAAAGACCACGCTGGTAGAGCTTCCCATAGCAAAAGTGGTTGAGCCATCAGAAACCCTCACGA
TAGTGTCAGAGACACCTACTGAGGTGCACCCTGAACCAAGCCCATCAACAATGGATTTTCCAGAGTCATC
TACAACTGACGTGCAAAGATTGCCAGAGCAGCCTGTAGAAGCACCATCGGAGATTGCAGATTCATCCATG
ACAAGACCTCAGGAGTCACTGGAGCTGCCTAAGACCACAGCGGTGGAGCTGCAGGAGTCGACGGTGGCCT
CAGCTCTGGAGTTGCCGGGGCCACCTGCGACCTCCATTCTGGAGTTGCAGGGGCCCCCTGTGACTCCAGT
GCCAGAGTTGCCTGGGCCCTCTGCCACCCCAGTGCCAGAGTTGTCAGGGCCCCTTTCTACCCCAGTGCCT
GAGTTGCCAGGGCCCCCTGCGACAGTGGTCCCTGAGTTGCCGGGGCCCTCTGTGACACCAGTGCCACAGT
TGTCGCAGGAATTGCCAGGGCCTCCAGCACCATCCATGGGGTTGGAGCCACCACAGGAGGTACCAGAGCC
ACCTGTGATGGCACAGGAGTTATCAGGGGTGCCTGCAGTGTCGGCAGCGATAGAGTTGACAGGGCAACCT
GCAGTAACAGTAGCAATGGAGTTGACCGAACAACCTGTGACGACGACAGAGTTCGAGCAGCCTGTGGCGA
TGACAACGGTGGAGCATCCTGGGCATCCTGAGGTGACAACAGCTACAGGGTTGCTGGGGCAGCCAGAGGC
AGCAATGGTGCTGGAGTTGCCAGGCCAGCCAGTGGCAACCACAGCGCTGGAGTTGTCTGGGCAGCCTTCG
GTGACTGGGGTGCCAGAGTTGTCAGGGCTGCCTTCGGCAACTAGGGCACTGGAGTTGTCAGGGCAGTCTG
TGGCAACTGGGGCATTAGAGTTGCCTGGTCAGCTCATGGCAACTGGGGCACTGGAGTTTTCGGGGCAGTC
TGGGGCAGCTGGAGCACTGGAGCTTTTGGGGCAGCCCCTAGCAACGGGGGTGCTAGAGTTACCAGGGCAG
CCTGGAGCGCCAGAGTTGCCTGGGCAGCCTGTGGCAACTGTGGCGCTGGAGATCTCTGTTCAGTCTGTGG
TGACAACATCGGAGCTGTCAACGATGACCGTGTCGCAGTCCCTGGAGGTGCCCTCGACGACAGCGCTGGA
ATCCTATAATACGGTAGCACAGGAGCTGCCTACTACATTGGTGGGGGAGACTTCTGTAACAGTAGGAGTG
GACCCCTTGATGGCCCAAGAATCCCATATGCTAGCTTCTAACACCATGGAGACCCATATGTTAGCATCCA
ATACCATGGACTCCCAGATGCTAGCATCCAACACTATGGATTCTCAGATGCTAGCATCCAATACCATGGA
CTCCCAGATGTTAGCCTCTAGCACCATGGACTCCCAGATGTTAGCCTCTAGCACCATGGACTCCCAGATG
TTAGCAACTAGCACCATGGACTCCCAGATGTTAGCAACTAGCTCTATGGACTCCCAGATGTTAGCAACTA
GCTCTATGGACTCCCAGATGTTAGCAACCAGCAGTATGGACTCCCAGATGTTAGCAACCAGCAGTATGGA
CTCCCAGATGTTAGCAACCAGCTCCATGGACTCCCAGATGTTAGCAACCAGCAGTATGGACTCCCAGATG
TTAGCAACCAGCAGTATGGACTCCCAGATGTTAGCAACCAGTTCCATGGACTCCCAGATGTTAGCATCTG
GTGCTATGGATTCTCAGATGTTAGCTTCTGGCACTATGGATGCTCAGATGTTAGCATCTGGTACTATGGA
TGCCCAAATGTTAGCATCTAGTACCCAGGATTCTGCTATGATGGGTTCAAAGTCTCCTGATCCCTATAGG
TTAGCTCAGGATCCTTACAGATTAGCTCAGGATCCCTATAGGTTGGGTCATGACCCCTACAGGTTAGGCC
ATGATGCTTACAGGTTAGGACAAGACCCTTATAGATTAGGCCATGATCCCTACAGACTAACTCCGGATCC
CTATAGGGTATCACCTAGGCCCTATAGAATAGCACCCAGGTCCTATAGGATAGCACCTAGGCCATACAGG
TTAGCACCTAGACCCTTGATGTTAGCATCTAGACGTTCTATGATGATGTCCTATGCTGCAGAACGTTCCA
TGATGTCATCTTATGAGCGCTCTATGATGTCTTATGAACGCTCTATGATGTCCCCTATGGCTGAACGCTC
TATGATGTCGGCCTATGAGCGCTCCATGATGTCAGCTTATGAGCGCTCCATGATGTCTCCTATGGCTGAG
CGTTCTATGATGTCAGCTTATGAGCGCTCTATGATGTCAGCTTATGAGCGCTCCATGATGTCTCCTATGG
CTGATCGATCCATGATGTCCATGGGTGCCGACCGGTCTATGATGTCATCGTACTCTGCAGCTGACCGGTC
TATGATGTCATCGTACTCTGCAGCTGATCGATCAATGATGTCATCTTACACTGATCGATCAATGATGTCT
ATGGCAGCTGATTCTTACACTGATTCTTATACTGATTCCTATACGGAGGCATATATGGTGCCACCTTTGC
CTCCTGAAGAGCCCCCAACAATGCCACCATTGCCACCCGAGGAACCACCAATGACACCCCCATTACCTCC
TGAGGAACCACCAGAGGGTCCAGCATTATCAACAGAGCAGTCAGCATTAACAGCTGACAATACTTGGTCT
ACAGAGGTGACATTATCTACTGGAGAATCTCTATCACAGCCTGAGCCTCCTGTGAGTCAAAGTGAGATTT
CAGAGCCTATGGCAGTACCTGCTAATTATTCAATGTCAGAATCAGAAACTTCAATGTTAGCATCAGAGGC
TGTTATGACTGTTCCAGAACCTGCACGAGAGCCCGAGTCTTCAGTTACATCAGCACCAGTTGAGTCTGCT
GTAGTAGCAGAACATGAAATGGTTCCAGAGAGACCGATGACTTACATGGTTTCTGAGACTACCATGTCAG
TCGAGCCAGCTGTGTTAACATCAGAGGCTTCTGTTATATCAGAGACATCAGAAACATATGATTCCATGAG
ACCTTCAGGACATGCTATCTCAGAGGTAACTATGTCACTCTTGGAGCCAGCAGTAACTATTTCACAGCCA
GCAGAGAACAGTCTAGAGCTCCCATCCATGACTGTCCCAGCACCTTCTACTATGACTACCACAGAATCTC
CAGTTGTTGCTGTCACAGAAATTCCTCCTGTGGCTGTCCCAGAACCTCCCATTATGGCTGTTCCAGAACT
CCCCACCATGGCTGTAGTAAAAACCCCCGCTGTGGCTGTCCCAGAACCTCTTGTGGCTGCTCCAGAGCCT
CCTACCATGGCTACTCCAGAACTTTGCTCCTTATCTGTCTCAGAACCTCCTGTGGCTGTCTCGGAGCTTC
CAGCTTTGGCTGACCCAGAGCATGCTATCACTGCAGTGTCAGGTGTTTCTTCCCTGGAGCCTTCTGTGCC
TATTTTGGAACCAGCAGTATCAGTCCTTCAACCTGTTATGATTGTTTCAGAACCGTCTGTTCCTGTCCAG
GAACCTACCGTGGCAGTGTCAGAACCTGCTGTCATAGTCTCAGAGCACACGCAAATAACATCACCTGAGA
TGGCTGTAGAGTCTTCACCAGTAATAGTGGACTCTAGTGTTATGTCATCACAGATTATGAAAGGAATGAA
TTTGCTTGGTGGTGATGAAAATCTTGGTCCAGAGGTTGGCATGCAGGAGACTCTGTTGCATCCAGGTGAA
GAGCCACGTGATGGAGGACACTTGAAAAGTGACTTGTATGAAAATGAGTATGATAGAAATGCAGACCTTA
CTGTAAACAGTCATTTAATTGTTAAAGATGCAGAGCATAACACAGTGTGTGCTACTACCGTTGGTCCTGT
TGGTGAAGCAAGTGAAGAGAAAATTTTGCCTATTAGTGAGACTAAGGAAATCACAGAATTGGCTACCTGT
GCTGCCGTCAGCGAAGCTGACATAGGCAGAAGTCTGTCTTCTCAGCTTGCTCTGGAGCTGGATACAGTAG
GAACTAGTAAGGGGTTTGAATTTGTCACTGCATCTGCACTCATTTCAGAGAGTAAATATGATGTTGAAGT
ATCTGTAACTACTCAAGATACTGAACATGACATGGTAATTTCCACCAGCCCCAGTGGTGGCAGCGAAGCA
GACATAGAGGGACCTTTGCCTGCTAAAGACATTCATCTTGATTTGCCATCAACTAATTTTGTTTGTAAGG
ATGTAGAAGACTCGTTACCTATCAAAGAGAGTGCCCAGGCAGTGGCAGTGGCTCTTAGCCCTAAAGAGAG
CAGTGAAGATACAGAAGTACCTCTTCCCAATAAAGAAATAGTTCCTGAGTCAGGATATTCTGCCAGCATT
GATGAAATTAATGAAGCTGACTTAGTGAGACCATTACTTCCTAAGGACATGGAGCGTCTTACAAGCCTTA
GAGCTGGCATTGAAGGACCTTTACTTGCTAGTGAGGTTGAACGTGACAAGTCAGCTGCCAGTCCAGTTGT
AATTAGCATACCAGAAAGAGCTTCAGAGTCATCTTCAGAGGAAAAGGATGATTATGAAATTTTTGTCAAA
GTTAAGGACACACATGAAAAAAGCAAGAAAAACAAAAACCGTGACAAAGGTGAGAAGGAGAAGAAAAGGG
ACTCTTCATTACGGTCTCGGAGTAAGCGTTCCAAGTCTTCTGAACATAAGTCACGCAAGCGCACCAGTGA
GTCGCGTTCTAGAGCAAGGAAGAGGTCGTCCAAGTCCAAATCTCACCGTTCTCAGACACGGTCACGGTCA
CGCTCAAGACGCAGGAGGAGGAGTAGCCGATCAAGATCTAAGTCTAGAGGAAGACGGTCTGTATCAAAAG
AGAAACGCAAAAGGTCTCCAAAGCATAGATCCAAGTCCAGGGAAAGGAAAAGGAAAAGATCAAGCTCACG
AGACAACCGGAAAGCAGCTCGAGCTCGGAGTCGAACCCCGAGTCGGCGGAGTAGGAGCCACACTCCTAGT
CGGAGGAGACGGTCTAGATCTGTTGGTAGAAGGAGAAGTTTTAGCATTTCCCCCAGCCGCAGGAGCCGAA
CCCCCAGCCGCAGGAGCAGAACCCCCAGCCGCAGGAGCCGAACCCCCAGCCGCAGGAGCCGAACCCCCAG
CCGCAGGAGCCGAACCCCCAGCCGTCGGAGAAGATCACGGTCTGCGGTAAGAAGACGAAGCTTCAGTATA
TCACCGGTCAGATTAAGGCGATCAAGAACACCTTTGAGAAGAAGGTTTAGTAGATCTCCCATTCGGCGGA
AAAGATCCAGGTCTTCAGAAAGAGGCAGATCGCCCAAACGTCTAACAGATTTGGATAAGGCTCAATTACT
TGAAATAGCCAAAGCTAATGCAGCTGCCATGTGTGCTAAGGCTGGTGTTCCTTTACCACCAAACCTAAAG
CCTGCACCTCCACCTACAATAGAAGAGAAAGTTGCTAAAAAGTCTGGAGGAGCTACCATAGAAGAACTAA
CTGAGTTTTAG

Translation (2126 aa):
MAADIEQVFRSFVVSKFREIQQELSSGRSEGQLNGETNPPIEGNQAGDTAASARSLPNEEIVQKIEEVLS
GVLDTELRYKPDLKEASRKSRCVSVQTDPTDEVPTKKSKKHKKHKNKKKKKKKEKEKKYKRQPEESESKL
KSHHDGNLESDSFLKFDSEPSAAALEHPVRAFGLSEASETALVLEPPVVSMEVQESHVLETLKPATKAAE
LSVVSTSVISEQSEQPMPGMLEPSMTKILDSFTAAPVPMSTAALKSPEPVVTMSVEYQKSVLKSLETMPP
ETSKTTLVELPIAKVVEPSETLTIVSETPTEVHPEPSPSTMDFPESSTTDVQRLPEQPVEAPSEIADSSM
TRPQESLELPKTTAVELQESTVASALELPGPPATSILELQGPPVTPVPELPGPSATPVPELSGPLSTPVP
ELPGPPATVVPELPGPSVTPVPQLSQELPGPPAPSMGLEPPQEVPEPPVMAQELSGVPAVSAAIELTGQP
AVTVAMELTEQPVTTTEFEQPVAMTTVEHPGHPEVTTATGLLGQPEAAMVLELPGQPVATTALELSGQPS
VTGVPELSGLPSATRALELSGQSVATGALELPGQLMATGALEFSGQSGAAGALELLGQPLATGVLELPGQ
PGAPELPGQPVATVALEISVQSVVTTSELSTMTVSQSLEVPSTTALESYNTVAQELPTTLVGETSVTVGV
DPLMAQESHMLASNTMETHMLASNTMDSQMLASNTMDSQMLASNTMDSQMLASSTMDSQMLASSTMDSQM
LATSTMDSQMLATSSMDSQMLATSSMDSQMLATSSMDSQMLATSSMDSQMLATSSMDSQMLATSSMDSQM
LATSSMDSQMLATSSMDSQMLASGAMDSQMLASGTMDAQMLASGTMDAQMLASSTQDSAMMGSKSPDPYR
LAQDPYRLAQDPYRLGHDPYRLGHDAYRLGQDPYRLGHDPYRLTPDPYRVSPRPYRIAPRSYRIAPRPYR
LAPRPLMLASRRSMMMSYAAERSMMSSYERSMMSYERSMMSPMAERSMMSAYERSMMSAYERSMMSPMAE
RSMMSAYERSMMSAYERSMMSPMADRSMMSMGADRSMMSSYSAADRSMMSSYSAADRSMMSSYTDRSMMS
MAADSYTDSYTDSYTEAYMVPPLPPEEPPTMPPLPPEEPPMTPPLPPEEPPEGPALSTEQSALTADNTWS
TEVTLSTGESLSQPEPPVSQSEISEPMAVPANYSMSESETSMLASEAVMTVPEPAREPESSVTSAPVESA
VVAEHEMVPERPMTYMVSETTMSVEPAVLTSEASVISETSETYDSMRPSGHAISEVTMSLLEPAVTISQP
AENSLELPSMTVPAPSTMTTTESPVVAVTEIPPVAVPEPPIMAVPELPTMAVVKTPAVAVPEPLVAAPEP
PTMATPELCSLSVSEPPVAVSELPALADPEHAITAVSGVSSLEPSVPILEPAVSVLQPVMIVSEPSVPVQ
EPTVAVSEPAVIVSEHTQITSPEMAVESSPVIVDSSVMSSQIMKGMNLLGGDENLGPEVGMQETLLHPGE
EPRDGGHLKSDLYENEYDRNADLTVNSHLIVKDAEHNTVCATTVGPVGEASEEKILPISETKEITELATC
AAVSEADIGRSLSSQLALELDTVGTSKGFEFVTASALISESKYDVEVSVTTQDTEHDMVISTSPSGGSEA
DIEGPLPAKDIHLDLPSTNFVCKDVEDSLPIKESAQAVAVALSPKESSEDTEVPLPNKEIVPESGYSASI
DEINEADLVRPLLPKDMERLTSLRAGIEGPLLASEVERDKSAASPVVISIPERASESSSEEKDDYEIFVK
VKDTHEKSKKNKNRDKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSRS
RSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKAARARSRTPSRRSRSHTPS
RRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRRRSRSAVRRRSFSI
SPVRLRRSRTPLRRRFSRSPIRRKRSRSSERGRSPKRLTDLDKAQLLEIAKANAAAMCAKAGVPLPPNLK
PAPPPTIEEKVAKKSGGATIEELTEF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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