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Report for CCDS37648.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37648.1 Public Mus musculus 17 Daam2 23 108 98 CCDS HistoryNCBI Gene:76441Re-query CCDS DB by CCDS ID:37648.1Re-query CCDS DB by GeneID:76441See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37648.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000057610.7 ENSMUSP00000052085.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000057610.7Link to Ensembl Protein Viewer:ENSMUSP00000052085.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000057610Re-query CCDS DB by Protein ID:ENSMUSP00000052085
Original member Current member NCBI NM_001008231.2 NP_001008232.2 Accepted alive Link to Nucleotide Sequence:NM_001008231.2Link to Protein Sequence:NP_001008232.2Re-query CCDS DB by Nucleotide ID:NM_001008231Re-query CCDS DB by Protein ID:NP_001008232Link to BLAST:NP_001008232.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001008232.2 1115 Q80U19-1 1115 100% 0 0

Chromosomal Locations for CCDS 37648.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 49458526 49458747 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49459053 49459223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49460607 49460738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49462141 49462201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49463926 49464033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49464463 49464631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49469373 49469461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49469660 49469766 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49471963 49472047 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49473286 49473392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49474109 49474252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49476448 49476555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49479666 49479965 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49480430 49480614 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49480724 49480782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49482927 49483065 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49485377 49485494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49486444 49486510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49488187 49488290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49488945 49489055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49489994 49490327 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49493821 49493915 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49494375 49494449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49496125 49496214 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49498706 49498873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3348 nt):
ATGGCCCTCCGCAAGAGGAGTCCTCATGGCCTGGGCTTCCTTTGCTGCTTTGGAGGCAGTGACCTTCCCG
AGATCGACCTCCGGGACAGCCACCCACTGCAGTATCTGGAGTTCTCCGGTCCCATCCCGAATCCTGAGGA
GCTCAATGTCCGCTTTGCAGAGCTGGTGGATGAATTGGACCTCACAGATAAAAACCGAGAGGCTGTGTTT
GCACTACCACCCGAGAAGAAATGGCAGATCTACTGCAGCAAGAGGAAGGAGCAGGAGGATCCCAACAAGC
TGGCAACCAGTTGGCCTGAGTACTACATTGATCGTATCAATGCCATGGCCGCCATGCAGAATCTGTATGA
AACTGAAGATGAGGAGACAGACAAGAGGAACCAAGTTGTAGAAGACCTGAAGACAGCCCTCCGGACACAA
CCCATGAGGTTTGTGACCCGCTTCATCGATCTGGAAGGCCTGACCTGTCTGCTGAATTTCCTCCGGGGCA
TGGACCACACCACCTGTGAAAGCCGCATCCACACATCTCTCATTGGCTGCATCAAGGCTCTGATGAACAA
CTCTCAGGGCCGGGCACACGTCCTGGCACAACCTGAGGCCATCAGCATCATCGCTCAGAGCCTGCGCACA
GAGAACAGCAAGACCAAAGTTGCAGTGCTGGAGATCCTGGGTGCAGTGTGCCTTGTACCCGGAGGCCACA
AGAAGGTTCTACAGGCCATGCTACACTATCAGGCGTATGCAGCCGAGCGCACTCGTTTCCAGACTTTGCT
GAATGAACTGGATCGAAGCTTAGGCCGCTACCGGGATGAGGTAAACCTGAAGACAGCCATCATGTCCTTC
ATCAATGCTGTCCTCAATGCTGGCGCTGGAGAGGATAACCTGGAATTCCGCCTGCATCTCCGGTATGAGT
TCCTGATGCTGGGGATCCAGCCAGTGATTGATAAACTCCGGCAACACGAGAATGCCATCCTGGACAAGCA
TTTAGACTTCTTTGAGATGGTCCGGAATGAGGATGACCTGGAGCTAGCCAGGAGGTTTGACATGGTCCAC
ATTGACACAAAAAGTGCCTCCCAGATGTTTGAGCTGATCCACAAGAAGCTGAAGCACACGGAAGCCTATC
CCTGCCTGCTCTCTGTCCTGCACCACTGCCTGCAGATGCCCTACAAGCGGAATGGTGGCTACTTCCAGCA
GTGGCAGCTCCTGGACCGAATCCTTCAACAGATTGTCCTCCAGGATGAGCGAGGGGTGGACCCTGACCTG
GCCCCACTGGAAAACTTTAATGTCAAGAACATCGTTAACATGCTCATCAATGAGAATGAGGTGAAGCAGT
GGAGGGACCAGGCAGAGAAGTTTCGGAAAGAACACATGGAACTCATGAGCCGGCTGGAGAGAAAAGAGCG
GGAATGTGAGACAAAGACACTGGAGAAGGAGGAGATGATGCGGACGCTCAACAAGATGAAGGACAAACTG
GCCCGCGAGTCCCAGGAGCTGCGCCAAGCTAGGGGACAAGTGGCAGAGCTGGTAGCCCGACATAATGAGA
GCTCAACCGGCCCGGTGTCCTCCCCACCTCCCCCTGGAGGTCCACTCACCTTGTCTTCCTCCAGGACAAC
CAATGATCTGCCTCCACCCCCACCACCTCTCCCCTTTGATAGCTGCCCACCCCCACCCGCACCACCCCTC
CCTCCCGGAGGGCCTCCCATCCCCCCAGGTGCCCCACCCTGCTTCAGCTCAGGCCCACCCCCATCTCATG
ACCCCTTCTCCAGCAATGAAGCCCCACTCAGGAAAAAGCGCATTCCCCAGCCTTCACACCCACTGAAGTC
CTTCAACTGGGTCAAGCTGAATGAGGAGCGTGTTTCTGGCACCGTGTGGAATGAAATTGATGACTCGCAG
GTATTTCGGATTCTGGACCTGGAAGACTTTGAAAAAATGTTCTCGGCATATCAGAGGCACCAGGCTTGCA
TGCAGGAGGGGCCCCAGAGAGAGAGAGGAAATGTGAGAGACGGAGGGGCGGCGAGCAGACCTCTGCCAGC
TGTGGAGGCGAGTGCCCACAGAACTGAGAAGGCTTCTAGGTCTATGGTATCAGCTACAGGTGCCAAGAAA
GAACTGGGCTCCACGGAGGACATCTACATAACCTCCCGCAAGGTTAAAGAGCTGTCAGTCATCGATGGCC
GGAGGGCCCAGAACTGTATCATTCTTCTCTCCAAGCTGAAGCTTTCTAATGATGAAATACGGCAGGCCAT
CTTGCGGATGGATGAACAAGAAGACCTCGCTAAGGACATGCTGGAGCAGCTTCTCAAGTTCATCCCCGAG
AAGAGCGACATTGATCTCCTAGAAGAGCACAAACATGAGATTGAGAGGATGGCGCGTGCAGATCGCTTCC
TCTATGAAATGAGCAGGATCGACCATTACCAGCAACGGCTACAGGCCCTGTTCTTCAAGAAGAAGTTCCA
GGAACGCCTGGCTGAGGCCAAGCCCAAAGTAGAAGCCATCCTGCTGGCCTCCCGGGAGCTGACTCTCAGC
CAGCGCCTGAAGCAAATGCTGGAGGTGGTCCTAGCCATCGGCAACTTCATGAACAAGGGGCAGCGTGGCG
GTGCCTATGGCTTCCGGGTAGCCAGTCTCAACAAGATCGCTGACACCAAGTCCAGCATTGACAGGAACAT
CTCTCTGCTTCATTACCTGATCATGATCCTGGAGAAGCACTTCCCAGATATCCTGAACATGCCCTCAGAG
CTAAAGCACCTATCAGAAGCTGCCAAAGTCAACCTGGCAGAGCTGGAGAAGGAGGTGAGCATTCTCAGGA
GAGGCCTCCGAGCAGTGGAAGTGGAGTTGGAATATCAGAGACACCAGGCACGAGACCCCAATGACAAGTT
CGTCCCTGTCATGAGTGACTTCATCACAGTGTCTAGCTTCAGCTTCTCAGAGCTGGAGGACCAGCTGAAT
GAGGCCAGGGACAAGTTTGCCAAGGCACTGACACATTTCGGAGAGCAGGAGAGTAAGATGCAACCGGATG
AATTCTTTGGCATCTTCGACACCTTCCTGCAGGCCTTCTTGGAGGCCCGGCAGGACCTGGAGGCCATGCG
GAGGAGGAAGGAGGAAGATGAGCGGAGAGCACGTATGGAATTCATGTTGAAGGAACAGCGTGAGAAAGAG
AGATGGCAGAGGCAGAGGAAGGTCTTGGCTGGCGGCGCCCTGGAGGAGAGCGGCGAGTTTGATGACCTAG
TGTCAGCCCTGCGCTCTGGAGAAGTTTTCGATAAGGACTTAAGCAAGTTCAAGCGCAACCGGAAGCGGCC
CGGGAGCCAGGTTCCGGAGGTCACCCGCGAGCGGGCCATAAACAGGCTAAATTATTGA

Translation (1115 aa):
MALRKRSPHGLGFLCCFGGSDLPEIDLRDSHPLQYLEFSGPIPNPEELNVRFAELVDELDLTDKNREAVF
ALPPEKKWQIYCSKRKEQEDPNKLATSWPEYYIDRINAMAAMQNLYETEDEETDKRNQVVEDLKTALRTQ
PMRFVTRFIDLEGLTCLLNFLRGMDHTTCESRIHTSLIGCIKALMNNSQGRAHVLAQPEAISIIAQSLRT
ENSKTKVAVLEILGAVCLVPGGHKKVLQAMLHYQAYAAERTRFQTLLNELDRSLGRYRDEVNLKTAIMSF
INAVLNAGAGEDNLEFRLHLRYEFLMLGIQPVIDKLRQHENAILDKHLDFFEMVRNEDDLELARRFDMVH
IDTKSASQMFELIHKKLKHTEAYPCLLSVLHHCLQMPYKRNGGYFQQWQLLDRILQQIVLQDERGVDPDL
APLENFNVKNIVNMLINENEVKQWRDQAEKFRKEHMELMSRLERKERECETKTLEKEEMMRTLNKMKDKL
ARESQELRQARGQVAELVARHNESSTGPVSSPPPPGGPLTLSSSRTTNDLPPPPPPLPFDSCPPPPAPPL
PPGGPPIPPGAPPCFSSGPPPSHDPFSSNEAPLRKKRIPQPSHPLKSFNWVKLNEERVSGTVWNEIDDSQ
VFRILDLEDFEKMFSAYQRHQACMQEGPQRERGNVRDGGAASRPLPAVEASAHRTEKASRSMVSATGAKK
ELGSTEDIYITSRKVKELSVIDGRRAQNCIILLSKLKLSNDEIRQAILRMDEQEDLAKDMLEQLLKFIPE
KSDIDLLEEHKHEIERMARADRFLYEMSRIDHYQQRLQALFFKKKFQERLAEAKPKVEAILLASRELTLS
QRLKQMLEVVLAIGNFMNKGQRGGAYGFRVASLNKIADTKSSIDRNISLLHYLIMILEKHFPDILNMPSE
LKHLSEAAKVNLAELEKEVSILRRGLRAVEVELEYQRHQARDPNDKFVPVMSDFITVSSFSFSELEDQLN
EARDKFAKALTHFGEQESKMQPDEFFGIFDTFLQAFLEARQDLEAMRRRKEEDERRARMEFMLKEQREKE
RWQRQRKVLAGGALEESGEFDDLVSALRSGEVFDKDLSKFKRNRKRPGSQVPEVTRERAINRLNY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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