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Report for CCDS37669.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37669.1 Public Mus musculus 17 Dennd1c 23 108 98 CCDS HistoryNCBI Gene:70785Re-query CCDS DB by CCDS ID:37669.1Re-query CCDS DB by GeneID:70785See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37669.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000011623.8 ENSMUSP00000011623.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000011623.8Link to Ensembl Protein Viewer:ENSMUSP00000011623.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000011623Re-query CCDS DB by Protein ID:ENSMUSP00000011623
Original member NCBI NM_153551.1 NP_705779.1 Updated not alive Link to Nucleotide Sequence:NM_153551.1Link to Protein Sequence:NP_705779.1Re-query CCDS DB by Nucleotide ID:NM_153551Re-query CCDS DB by Protein ID:NP_705779
Current member NCBI NM_153551.2 NP_705779.1 Accepted alive Link to Nucleotide Sequence:NM_153551.2Link to Protein Sequence:NP_705779.1Re-query CCDS DB by Nucleotide ID:NM_153551Re-query CCDS DB by Protein ID:NP_705779Link to BLAST:NP_705779.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_705779.1 786 Q8CFK6-1 786 100% 0 0

Chromosomal Locations for CCDS 37669.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 57066111 57066641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57066732 57066942 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57067049 57067116 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57067593 57067700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57067789 57067833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57067917 57067949 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57070113 57070184 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57070408 57070448 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57070530 57070623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57070919 57071023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57071572 57071697 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57071788 57071889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57072009 57072054 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57072336 57072436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57073773 57073883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57073974 57074027 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57074114 57074179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57074274 57074354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57074493 57074562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57075369 57075488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57076647 57076696 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57076818 57076861 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57076941 57077005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57078390 57078406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2361 nt):
ATGGGATCCACAGAGACAAGGCATCCCCCTGCCATGTTTGACTGGTTCTTTGAAGCTGGCTGCCCCAACT
CCCTGGAAGAGGATCCCCCCATCCTGCGGCAGTTCCCTCCAGACTTCCAGGAGCAGGAAGCCATGCAGAT
GGTGCCCAGGTTCTGTTTCCCCTTCGACATAGAAAGGGAGCCACCCAGCCCTGCTGTTCAGCATTTCACC
TTTGCCCTCACTGACCTGGTGGGCAACCGTAGATTTGGCTTCTGCCGCCTGCGAGCTGGTGCACGGAGTT
GTCTCTGTATCCTCAGCCACTTTCCCTGGTTTGAAGTGTTCTACAAGATTCTCAATAACGTGGGGGACCT
TCTAGCCCAGAACCAAGTCGCCGAGGCTGAAGAACTCCTACAAAACCTACAGCAACACCCACTTCTTGGA
CCCCGGTTTTCAGGAAGATCAGAGATGGACAGCAGCATCACTGTCCGGAGTGAATGTGGAATCTTGCCTC
CTGCCCTGGGGAATAGCAAGCTGCTTTCTTGTTTTGTGGCTCCGGATGCCGCCAGCCTGCCATCTATTCC
TGAGAATAGGAACCTCACTGAGCTGGTGGTCGCTGTGACAGATGAGAACATCGTGGGGCTCTTCGCAGCG
CTGCTAGCTGAGAGGAGGGTCTTGCTCACTGCCAGCAAGCTCAGCACTCTGACAGCCTGTGTTCACGCAT
CCTGTGCCCTGCTCTACCCCATGCGCTGGGAGCACGTTCTGATCCCCACTCTACCCCCACACCTACTGGA
CTACTGCTGTGCGCCCATGCCCTACCTCATAGGAGTCCATGGCAGTCTCGCAGAGAGAGTCCGAGAAAAA
GCGCTGGAAGATGTTGTGGTGTTGAATGCAGACTCTAACACCCTGGAGACACCCTTTGACGATGTGCAAG
CTCTGCCGCCGGATGTGGTATCCCTGCTGAGGCTTCGGCTAAGGAAGGTTGCCCTGAGCCCTGGGGAAGG
GGTGTCCCGTCTCTTCCTCAAAGTGCAGGCCCTGCTCTTTGGAGGGTACCGTGATGCCCTTGTCTGCATC
CCGGGTCAGCCAGTGACCTTCAGTGAGGAAGCTTTTTTGGCTCAGAAGCCCGGGGCACCCCTGCAGGCAT
TCCACAAAAAGGCGGTACACTTGCAGCTGTTCAAGCAGTTCATCGAATCCCGACTGGAAAAACTCAATGC
TGGGGAAGGCTTCTCAGACCAATTTGAGCAAGAGATCATTGCCTGCCGCGGAGCTTCCTCAGGCACCCTT
CGGTCTTACCAGCTCTGGGTAGATAGTCTTAAGAAAGGTAGCGATGCCCTTCTGCATTCAATGAAGACAA
AAACCCAACCAGCTGTCAGGAACATGTACCGATCGGGTGACTCCCTCCAGGAATATTGTGCATCAAAGGC
AAAGAGTGGCTTGAAGGGTATGCAGAACCTGCTCACGATTAAGGATGGAGACTCTGGCCTGCAGAGGGGG
GGCTCCCTGAGAACCCCAAGCCTCACCAGCCGCTCTGATCGTCTGCAACAGCGCCTGCCTATTAGCCAGC
ACTTTGGACAGAACAGGCCCCTCCGCCCCAGCAGGAGACTCAAGACTGAAGAGGGACCTTCCGAACCCCT
GCGGGAGAGGAGCCCCACCTTGAGCCCTGGGGACACTCAGAACCCCTGGGCAGAAGATACTCTAGATGGC
AGCTTTCTGGGGTCTGGAGAAGAGCTGGATCTACTGAGTGAGATTCTAGACAGCCTGAACGTGGAAACCA
AGAGTGGCGACCTGCAGAGGGCCAGCCAGAGCTTAGACTGCTGTCAGCGAGGGGCGGCGTCAGAGAGCTG
CTCCAGCCTGCCTGACATCCCAGTGGGGTTACCATGGCAACTGGAAGAAGACAAGAGATCCCAGGATCCT
CAGCCTTGGTCCCTACCTGGTGACCTGTCACTTCTGCAAGACACCCCATTTTCAGAGGTTGTAAGCTACT
CAAAGAACTCCTGTTCTCAGCCATTTCAGCAGAGCCCCCCAAGCCAAGGGGACCCCGGGCCCTCTCTCAG
CAAGCTGGATCCTAGACCCTCACAAAGCCCCTGCCCCAAGCTCCTCAGAGTCCCCACTAGGCACAGTCCT
CCAGAAAGCCCCCAGCTTCTTGTCTCCACAGAGCCCAACTCTGATGCTGTCCAAAGATTACAATCCATTT
CGTCTCCCTCATGCTCTCATTCTGCAGAGAACCCCAGAAACCAGCCTCCCCAGGTCCTCCTGGGCCAGGC
TTGTGTACAACCCCTCGAGGAGCTGGGAGCCCCCACTTATGTCTCTCATGTAAGCACGCAGCAAAGGCCA
CAGGACAAGCAACCTCGAGTTGCTGATCTGAAGAAGTGTTTCGAAAACTAA

Translation (786 aa):
MGSTETRHPPAMFDWFFEAGCPNSLEEDPPILRQFPPDFQEQEAMQMVPRFCFPFDIEREPPSPAVQHFT
FALTDLVGNRRFGFCRLRAGARSCLCILSHFPWFEVFYKILNNVGDLLAQNQVAEAEELLQNLQQHPLLG
PRFSGRSEMDSSITVRSECGILPPALGNSKLLSCFVAPDAASLPSIPENRNLTELVVAVTDENIVGLFAA
LLAERRVLLTASKLSTLTACVHASCALLYPMRWEHVLIPTLPPHLLDYCCAPMPYLIGVHGSLAERVREK
ALEDVVVLNADSNTLETPFDDVQALPPDVVSLLRLRLRKVALSPGEGVSRLFLKVQALLFGGYRDALVCI
PGQPVTFSEEAFLAQKPGAPLQAFHKKAVHLQLFKQFIESRLEKLNAGEGFSDQFEQEIIACRGASSGTL
RSYQLWVDSLKKGSDALLHSMKTKTQPAVRNMYRSGDSLQEYCASKAKSGLKGMQNLLTIKDGDSGLQRG
GSLRTPSLTSRSDRLQQRLPISQHFGQNRPLRPSRRLKTEEGPSEPLRERSPTLSPGDTQNPWAEDTLDG
SFLGSGEELDLLSEILDSLNVETKSGDLQRASQSLDCCQRGAASESCSSLPDIPVGLPWQLEEDKRSQDP
QPWSLPGDLSLLQDTPFSEVVSYSKNSCSQPFQQSPPSQGDPGPSLSKLDPRPSQSPCPKLLRVPTRHSP
PESPQLLVSTEPNSDAVQRLQSISSPSCSHSAENPRNQPPQVLLGQACVQPLEELGAPTYVSHVSTQQRP
QDKQPRVADLKKCFEN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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