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Report for CCDS3770.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3770.1 Public Homo sapiens 4 TMEM184C 24 110 108 CCDS HistoryNCBI Gene:55751Re-query CCDS DB by CCDS ID:3770.1Re-query CCDS DB by GeneID:55751See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3770.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000296582.8 ENSP00000296582.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000296582.8Link to Ensembl Protein Viewer:ENSP00000296582.3Re-query CCDS DB by Nucleotide ID:ENST00000296582Re-query CCDS DB by Protein ID:ENSP00000296582
Original member Current member NCBI NM_018241.3 NP_060711.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018241.3Link to Protein Sequence:NP_060711.2Re-query CCDS DB by Nucleotide ID:NM_018241Re-query CCDS DB by Protein ID:NP_060711Link to BLAST:NP_060711.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060711.2 438 Q9NVA4-1 438 100% 0 0

Chromosomal Locations for CCDS 3770.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 147617957 147618079 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 147623834 147623964 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 147624062 147624098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 147624804 147625009 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 147628361 147628435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 147629599 147629692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 147631393 147631505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 147632903 147633002 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 147633765 147633936 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 147634169 147634434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1317 nt):
ATGCCTTGCACTTGTACCTGGAGGAACTGGAGACAGTGGATTCGACCTTTAGTAGCGGTCATCTACCTGG
TGTCAATAGTGGTTGCGGTTCCCCTATGCGTGTGGGAATTACAGAAACTGGAGGTTGGAATACACACCAA
GGCTTGGTTTATTGCTGGAATCTTTTTGCTGTTGACTATTCCTATATCACTGTGGGTGATATTGCAACAC
TTAGTGCATTATACACAACCTGAACTACAAAAACCAATAATAAGGATTCTTTGGATGGTACCTATTTACA
GTTTAGATAGTTGGATAGCTTTGAAATATCCCGGAATTGCAATATATGTGGATACCTGCAGAGAATGCTA
TGAAGCTTATGTAATTTACAACTTTATGGGATTCCTTACCAATTATCTAACTAACCGGTATCCAAATCTG
GTATTAATCCTTGAAGCCAAAGATCAACAGAAACATTTCCCTCCTTTATGTTGCTGTCCACCATGGGCTA
TGGGAGAAGTATTGCTGTTTAGGTGCAAACTAGGTGTATTACAGTACACAGTTGTCAGACCTTTCACCAC
CATCGTTGCTTTAATCTGTGAGCTGCTTGGTATATATGACGAAGGGAACTTTAGCTTTTCAAATGCTTGG
ACTTATTTGGTTATAATAAACAACATGTCACAGTTGTTTGCCATGTATTGTCTCCTGCTCTTTTATAAAG
TACTAAAAGAAGAACTGAGCCCAATCCAACCTGTTGGCAAATTTCTTTGTGTAAAGCTGGTGGTTTTTGT
TTCTTTTTGGCAAGCAGTAGTTATTGCTTTGTTGGTAAAAGTTGGCGTTATTTCTGAAAAGCATACGTGG
GAATGGCAAACTGTAGAAGCTGTGGCCACCGGACTCCAGGATTTTATTATCTGTATTGAGATGTTCCTCG
CTGCCATTGCTCATCATTACACATTCTCATATAAACCATATGTCCAAGAAGCAGAAGAGGGCTCATGCTT
TGATTCCTTTCTTGCCATGTGGGATGTCTCAGATATTAGAGATGATATTTCTGAACAAGTAAGGCATGTT
GGACGGACAGTCAGGGGACATCCCAGGAAAAAATTGTTTCCCGAGGATCAAGATCAAAATGAACATACAA
GTTTATTATCATCATCATCACAAGATGCAATTTCCATTGCTTCTTCTATGCCACCTTCACCCATGGGTCA
CTACCAAGGGTTTGGACACACTGTGACTCCCCAGACTACACCTACCACAGCTAAGATATCTGATGAAATC
CTTAGTGATACTATAGGAGAGAAAAAAGAACCTTCAGATAAATCCGTGGATTCCTGA

Translation (438 aa):
MPCTCTWRNWRQWIRPLVAVIYLVSIVVAVPLCVWELQKLEVGIHTKAWFIAGIFLLLTIPISLWVILQH
LVHYTQPELQKPIIRILWMVPIYSLDSWIALKYPGIAIYVDTCRECYEAYVIYNFMGFLTNYLTNRYPNL
VLILEAKDQQKHFPPLCCCPPWAMGEVLLFRCKLGVLQYTVVRPFTTIVALICELLGIYDEGNFSFSNAW
TYLVIINNMSQLFAMYCLLLFYKVLKEELSPIQPVGKFLCVKLVVFVSFWQAVVIALLVKVGVISEKHTW
EWQTVEAVATGLQDFIICIEMFLAAIAHHYTFSYKPYVQEAEEGSCFDSFLAMWDVSDIRDDISEQVRHV
GRTVRGHPRKKLFPEDQDQNEHTSLLSSSSQDAISIASSMPPSPMGHYQGFGHTVTPQTTPTTAKISDEI
LSDTIGEKKEPSDKSVDS


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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