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Report for CCDS38192.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
38192.1 Public Mus musculus 2 Immp1l 23 108 98 CCDS HistoryNCBI Gene:66541Re-query CCDS DB by CCDS ID:38192.1Re-query CCDS DB by GeneID:66541See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 38192.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000037499.5 ENSMUSP00000049044.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000037499.5Link to Ensembl Protein Viewer:ENSMUSP00000049044.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000037499Re-query CCDS DB by Protein ID:ENSMUSP00000049044
Original member NCBI NM_028260.2 NP_082536.1 Updated not alive Link to Nucleotide Sequence:NM_028260.2Link to Protein Sequence:NP_082536.1Re-query CCDS DB by Nucleotide ID:NM_028260Re-query CCDS DB by Protein ID:NP_082536
Current member NCBI NM_028260.3 NP_082536.1 Accepted alive Link to Nucleotide Sequence:NM_028260.3Link to Protein Sequence:NP_082536.1Re-query CCDS DB by Nucleotide ID:NM_028260Re-query CCDS DB by Protein ID:NP_082536Link to BLAST:NP_082536.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_082536.1 166 Q9CQU8 166 100% 0 0

Chromosomal Locations for CCDS 38192.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 105930748 105930852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 105933265 105933353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 105936992 105937118 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 105964180 105964290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 105965264 105965332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (501 nt):
ATGCTTCGTGGTGTTCTGGGAAAGGCTTTTCGACTTGCTGGCTATACCATTCAGTATGGCTGCATAGCTC
ATTGTGCTTTTGAATACGTTGGTGGTGTTGTAATGTGTTCTGGACCATCAATGGAACCCACAATTCAAAA
TTCAGATATTGTCTTTGCAGAAAATCTTAGCCGACATTTTTATGGCATCCAAAGAGGTGACATTGTAATT
GCAAAAAGCCCAAGTGATCCAAAATCAAATATCTGTAAAAGAGTAATTGGTTTGGAAGGAGACAAAATCC
TCAGCACTAGTCCATCTGATGTATTTAAGAGCCGCAGTTACGTGCCAACAGGTCATGTTTGGTTAGAAGG
TGATAACTTACAGAATTCTACCGATTCCAGGTATTATGGACCTATACCATATGGACTAATAAGAGGACGT
ATCTTCTTTAAGATTTGGCCTTTCAGTGACTTCGGATTTCTGCGTGACAGCCCAAATGGCCAGAGATTTT
CTGATGATTAA

Translation (166 aa):
MLRGVLGKAFRLAGYTIQYGCIAHCAFEYVGGVVMCSGPSMEPTIQNSDIVFAENLSRHFYGIQRGDIVI
AKSPSDPKSNICKRVIGLEGDKILSTSPSDVFKSRSYVPTGHVWLEGDNLQNSTDSRYYGPIPYGLIRGR
IFFKIWPFSDFGFLRDSPNGQRFSDD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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