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Report for CCDS38691.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
38691.1 Public Mus musculus 4 Ndufaf6 23 108 98 CCDS HistoryNCBI Gene:76947Re-query CCDS DB by CCDS ID:38691.1Re-query CCDS DB by GeneID:76947See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 38691.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000058183.8 ENSMUSP00000062039.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000058183.8Link to Ensembl Protein Viewer:ENSMUSP00000062039.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000058183Re-query CCDS DB by Protein ID:ENSMUSP00000062039
Original member Current member NCBI NM_001085493.2 NP_001078962.1 Accepted alive Link to Nucleotide Sequence:NM_001085493.2Link to Protein Sequence:NP_001078962.1Re-query CCDS DB by Nucleotide ID:NM_001085493Re-query CCDS DB by Protein ID:NP_001078962Link to BLAST:NP_001078962.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001078962.1 333 A2AIL4 333 100% 0 0

Chromosomal Locations for CCDS 38691.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 11051097 11051225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 11053432 11053488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 11059012 11059113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 11060861 11060994 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 11062050 11062152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 11066651 11066707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 11070200 11070322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 11073144 11073243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 11075980 11076176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1002 nt):
ATGGCGACCTCCATGCTGGGTTCTGTCCGCGGCCCAAGGCCATTCGGTTTGGCTAACCTGTTCCATCGCC
AGCCGCCTCGGGATGCGTGGGAACGTGTGCGGCGCCTGCCGGGGCCCTCGGCGGTCCGGCGCAGCGTGGC
GGCGGCCAGCGGGCCAGGCATCCCCGGTTCCCACCTCTACTGCCTGGAGCTGCTGAGGAAACGAGATTAT
GAAAGCTACTTGTGTTCCTTACTGTTCCCTGCAGAGTGTCAAAGGTCTGCTTCTGCACTGCGGGCCTTCA
ATGTGGAACTGGCTCAGGTTAAGGACTCAGTCTCTGAGAAAACAATTGGACTGATGCGCATGCAGTTCTG
GAAAAAAGCTGTGGAAGATATGTACTGTGACAACCCACCACACCAGCCGGTGGCCATTGAACTCTGGAAG
GCTGTCAAGAAACATAACCTAACTAAAAGGTGGCTCATGAGAATCATTGATGAAAGAGAAAAAAATCTGG
ATGACAAAGCGTACCGCAGTATGCAGGAACTTGAAAATTATGCTGAGAATACGCAGGGTTCCCTGCTCTA
CCTGACACTGGAGGTGCTGGGCGTGAAGGATCTTCATGCAGATCATGCTGCAAGCCACATTGGAAAGGCA
CAAGGCATTGTCACGTGCTTGAGAGCAACACCCTATCACAGTAGCAGGAGACAGGTGTTCCTGCCCATGG
ATGTCTGTGTGCAGCATGGTGTTTCACAAGAGGACTTTCTACGGAGGAACCAAGATAAAAATGTGAGAGA
TGTAGTATATGACATTGCCAGCCAGGCCCACTTGCACCTAAAGCATGCGAGGTCCTTCCACAGAAGCGTC
CCTGCGGAAGCGTTTCCTGCTTTTCTTCAGACGGTTTCTCTAGAGGACTACTTAAAGAAAATCCAGCGAG
TAGACTTTGATATATTCCATCCGTCTTTACAGCAGAAGAACATGTTACTTCCATTATCTTTGTATATTCA
ATCATGGAGAAAAAGATACTAA

Translation (333 aa):
MATSMLGSVRGPRPFGLANLFHRQPPRDAWERVRRLPGPSAVRRSVAAASGPGIPGSHLYCLELLRKRDY
ESYLCSLLFPAECQRSASALRAFNVELAQVKDSVSEKTIGLMRMQFWKKAVEDMYCDNPPHQPVAIELWK
AVKKHNLTKRWLMRIIDEREKNLDDKAYRSMQELENYAENTQGSLLYLTLEVLGVKDLHADHAASHIGKA
QGIVTCLRATPYHSSRRQVFLPMDVCVQHGVSQEDFLRRNQDKNVRDVVYDIASQAHLHLKHARSFHRSV
PAEAFPAFLQTVSLEDYLKKIQRVDFDIFHPSLQQKNMLLPLSLYIQSWRKRY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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