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Report for CCDS38797.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
38797.1 Public Mus musculus 4 Mllt3 23 108 98 CCDS HistoryNCBI Gene:70122Re-query CCDS DB by CCDS ID:38797.1Re-query CCDS DB by GeneID:70122See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 38797.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000149357.7 ENSMUSP00000128366.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000149357.7Link to Ensembl Protein Viewer:ENSMUSP00000128366.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000149357Re-query CCDS DB by Protein ID:ENSMUSP00000128366
Original member NCBI NM_029931.3 NP_084207.2 Updated not alive Link to Nucleotide Sequence:NM_029931.3Link to Protein Sequence:NP_084207.2Re-query CCDS DB by Nucleotide ID:NM_029931Re-query CCDS DB by Protein ID:NP_084207
Current member NCBI NM_029931.4 NP_084207.2 Accepted alive Link to Nucleotide Sequence:NM_029931.4Link to Protein Sequence:NP_084207.2Re-query CCDS DB by Nucleotide ID:NM_029931Re-query CCDS DB by Protein ID:NP_084207Link to BLAST:NP_084207.2

Chromosomal Locations for CCDS 38797.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 87774015 87774146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 87782287 87782358 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 87783649 87783720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 87789287 87789386 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 87791853 87791965 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (489 nt):
ATGAAAGATCTGCATTCTGATGACAACGAGGAGGAGTCTGATGAGGCAGAGGACAATGACAATGACTCGG
AGATGGAAAGACCTGTAAATAGAGGAGGAAGCCGAAGTCGCAGGGTCAGCTTGAGTGACGGCAGTGACAG
TGAAAGCAGCTCCGCCTCTTCCCCTCTCCATCATGAACCCCCGCCACCATTATTGAAAACTAACAACAAC
CAGATCCTTGAAGTGAAAAGTCCAATAAAACAAAGCAAATCAGATAAGCAAATAAAGAATGGTGAATGTG
ACAAGGCATATCTAGATGAGTTGGTAGAGCTCCACAGAAGGTTAATGACACTGAGGGAACGACACATTCT
GCAGCAGATCGTGAACCTTATAGAGGAAACTGGACACTTTCATATTACGAATACAACATTTGATTTTGAT
CTTTGCTCGCTGGACAAAACTACAGTCCGTAAATTACAGAGTTACCTGGAAACATCTGGAACATCCTGA

Translation (162 aa):
MKDLHSDDNEEESDEAEDNDNDSEMERPVNRGGSRSRRVSLSDGSDSESSSASSPLHHEPPPPLLKTNNN
QILEVKSPIKQSKSDKQIKNGECDKAYLDELVELHRRLMTLRERHILQQIVNLIEETGHFHITNTTFDFD
LCSLDKTTVRKLQSYLETSGTS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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