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Report for CCDS39914.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
39914.1 Public Mus musculus 7 Ccne1 23 108 98 CCDS HistoryNCBI Gene:12447Re-query CCDS DB by CCDS ID:39914.1Re-query CCDS DB by GeneID:12447See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 39914.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000108023.9 ENSMUSP00000103658.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000108023.9Link to Ensembl Protein Viewer:ENSMUSP00000103658.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000108023Re-query CCDS DB by Protein ID:ENSMUSP00000103658
Original member Current member NCBI NM_007633.2 NP_031659.2 Accepted alive Link to Nucleotide Sequence:NM_007633.2Link to Protein Sequence:NP_031659.2Re-query CCDS DB by Nucleotide ID:NM_007633Re-query CCDS DB by Protein ID:NP_031659Link to BLAST:NP_031659.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031659.2 408 Q61457 408 100% 0 0

Chromosomal Locations for CCDS 39914.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 38098515 38098637 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 38098992 38099149 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 38099247 38099358 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 38099468 38099602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 38099789 38099884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 38100555 38100701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 38102786 38102921 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 38103046 38103194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 38106279 38106347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 38106596 38106683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 38106787 38106800 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1227 nt):
ATGCCAAGGGAGAGAGACTCGACGGACCACAGCAACATGAAAGAAGAAGGTGGCTCCGACCTTTCAGTCC
GCTCCAGAAAAAGGAAGGCAAATGTGGCCGTGTTTTTGCAAGACCCAGATGAAGAAATTGCCAAGATTGA
CAAGACTGTGAAAAGCGAGGATAGCAGTCAGCCCTGGGATGATAATTCAGCATGCGTGGACCCCTGCTCT
TTCATCCCCACCCCTAACAAAGAAGAGGACAATGAGCTTGAATACCCCAGGACTGCATTTCAGCCTCGGA
AAATCAGACCACCCAGAGCCTCCCCACTTCCCGTCTTGAATTGGGGCAATAGAGAAGAGGTTTGGAGGAT
CATGTTAAACAAAGAAAAGACTTACCTGAGAGATGAGCACTTTCTGCAGCGTCATCCTCTCCTGCAGGCG
AGGATGAGAGCAGTTCTTCTGGATTGGCTAATGGAGGTGTGCGAAGTCTATAAGCTCCACAGAGAGACGT
TCTACTTGGCACAGGACTTCTTTGATCGTTACATGGCATCACAACATAATATCATAAAAACACTTTTACA
GCTTATTGGGATTTCAGCCTTATTTATTGCTTCAAAACTTGAGGAAATCTACCCTCCAAAGTTGCACCAG
TTTGCTTATGTTACAGATGGCGCTTGCTCCGGGGATGAAATTCTTACCATGGAATTGATGATGATGAAGG
CCCTTAAGTGGCGTCTAAGCCCTCTGACCATTGTGTCCTGGCTGAATGTCTATGTCCAAGTGGCCTATGT
CAACGACACGGGTGAGGTGCTGATGCCTCAGTACCCACAGCAGGTCTTCGTGCAGATCGCAGAGCTTCTA
GACCTGTGCGTCCTGGATGTTGGCTGCTTAGAATTTCCTTATGGTGTCCTCGCTGCTTCTGCTTTGTATC
ATTTCTCCTCACTGGAGTTGATGCAGAAGGTCTCAGGTTATCAGTGGTGCGACATAGAGAAGTGTGTCAA
ATGGATGGTTCCGTTCGCCATGGTTATCCGGGAGATGGGAAGTTCCAAGCTCAAGCACTTCCGGGGAGTC
CCCATGGAAGACTCCCACAACATCCAGACCCACACCAACAGCTTGGATTTGCTGGACAAAGCCCAAGCAA
AGAAAGCCATATTGTCAGAACAGAATAGGATTTCTCCTCCTCCGAGTGTGGTCCTGACACCCCCACCCAG
CAGTAAGAAGCAGAGCAGCGAGCAGGAGACAGAATGA

Translation (408 aa):
MPRERDSTDHSNMKEEGGSDLSVRSRKRKANVAVFLQDPDEEIAKIDKTVKSEDSSQPWDDNSACVDPCS
FIPTPNKEEDNELEYPRTAFQPRKIRPPRASPLPVLNWGNREEVWRIMLNKEKTYLRDEHFLQRHPLLQA
RMRAVLLDWLMEVCEVYKLHRETFYLAQDFFDRYMASQHNIIKTLLQLIGISALFIASKLEEIYPPKLHQ
FAYVTDGACSGDEILTMELMMMKALKWRLSPLTIVSWLNVYVQVAYVNDTGEVLMPQYPQQVFVQIAELL
DLCVLDVGCLEFPYGVLAASALYHFSSLELMQKVSGYQWCDIEKCVKWMVPFAMVIREMGSSKLKHFRGV
PMEDSHNIQTHTNSLDLLDKAQAKKAILSEQNRISPPPSVVLTPPPSSKKQSSEQETE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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