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Report for CCDS4031.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4031.1 Public Homo sapiens 5 F2RL2 24 110 108 CCDS HistoryNCBI Gene:2151Re-query CCDS DB by CCDS ID:4031.1Re-query CCDS DB by GeneID:2151See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4031.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000296641.5 ENSP00000296641.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000296641.5Link to Ensembl Protein Viewer:ENSP00000296641.3Re-query CCDS DB by Nucleotide ID:ENST00000296641Re-query CCDS DB by Protein ID:ENSP00000296641
Original member Current member NCBI NM_004101.4 NP_004092.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004101.4Link to Protein Sequence:NP_004092.1Re-query CCDS DB by Nucleotide ID:NM_004101Re-query CCDS DB by Protein ID:NP_004092Link to BLAST:NP_004092.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004092.1 374 O00254-1 374 100% 0 0

Chromosomal Locations for CCDS 4031.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 76617582 76618642 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 76623167 76623230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1125 nt):
ATGAAAGCCCTCATCTTTGCAGCTGCTGGCCTCCTGCTTCTGTTGCCCACTTTTTGTCAGAGTGGCATGG
AAAATGATACAAACAACTTGGCAAAGCCAACCTTACCCATTAAGACCTTTCGTGGAGCTCCCCCAAATTC
TTTTGAAGAGTTCCCCTTTTCTGCCTTGGAAGGCTGGACAGGAGCCACGATTACTGTAAAAATTAAGTGC
CCTGAAGAAAGTGCTTCACATCTCCATGTGAAAAATGCTACCATGGGGTACCTGACCAGCTCCTTAAGTA
CTAAACTGATACCTGCCATCTACCTCCTGGTGTTTGTAGTTGGTGTCCCGGCCAATGCTGTGACCCTGTG
GATGCTTTTCTTCAGGACCAGATCCATCTGTACCACTGTATTCTACACCAACCTGGCCATTGCAGATTTT
CTTTTTTGTGTTACATTGCCCTTTAAGATAGCTTATCATCTCAATGGGAACAACTGGGTATTTGGAGAGG
TCCTGTGCCGGGCCACCACAGTCATCTTCTATGGCAACATGTACTGCTCCATTCTGCTCCTTGCCTGCAT
CAGCATCAACCGCTACCTGGCCATCGTCCATCCTTTCACCTACCGGGGCCTGCCCAAGCACACCTATGCC
TTGGTAACATGTGGACTGGTGTGGGCAACAGTTTTCTTATATATGCTGCCATTTTTCATACTGAAGCAGG
AATATTATCTTGTTCAGCCAGACATCACCACCTGCCATGATGTTCACAACACTTGCGAGTCCTCATCTCC
CTTCCAACTCTATTACTTCATCTCCTTGGCATTCTTTGGATTCTTAATTCCATTTGTGCTTATCATCTAC
TGCTATGCAGCCATCATCCGGACACTTAATGCATACGATCATAGATGGTTGTGGTATGTTAAGGCGAGTC
TCCTCATCCTTGTGATTTTTACCATTTGCTTTGCTCCAAGCAATATTATTCTTATTATTCACCATGCTAA
CTACTACTACAACAACACTGATGGCTTATATTTTATATATCTCATAGCTTTGTGCCTGGGTAGTCTTAAT
AGTTGCTTAGATCCATTCCTTTATTTTCTCATGTCAAAAACCAGAAATCACTCCACTGCTTACCTTACAA
AATAG

Translation (374 aa):
MKALIFAAAGLLLLLPTFCQSGMENDTNNLAKPTLPIKTFRGAPPNSFEEFPFSALEGWTGATITVKIKC
PEESASHLHVKNATMGYLTSSLSTKLIPAIYLLVFVVGVPANAVTLWMLFFRTRSICTTVFYTNLAIADF
LFCVTLPFKIAYHLNGNNWVFGEVLCRATTVIFYGNMYCSILLLACISINRYLAIVHPFTYRGLPKHTYA
LVTCGLVWATVFLYMLPFFILKQEYYLVQPDITTCHDVHNTCESSSPFQLYYFISLAFFGFLIPFVLIIY
CYAAIIRTLNAYDHRWLWYVKASLLILVIFTICFAPSNIILIIHHANYYYNNTDGLYFIYLIALCLGSLN
SCLDPFLYFLMSKTRNHSTAYLTK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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