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Report for CCDS40527.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40527.1 Public Mus musculus 9 Ddi1 23 108 98 CCDS HistoryNCBI Gene:71829Re-query CCDS DB by CCDS ID:40527.1Re-query CCDS DB by GeneID:71829See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 40527.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000051706.5 ENSMUSP00000053223.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000051706.5Link to Ensembl Protein Viewer:ENSMUSP00000053223.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000051706Re-query CCDS DB by Protein ID:ENSMUSP00000053223
Original member Current member NCBI NM_027942.1 NP_082218.1 Accepted alive Link to Nucleotide Sequence:NM_027942.1Link to Protein Sequence:NP_082218.1Re-query CCDS DB by Nucleotide ID:NM_027942Re-query CCDS DB by Protein ID:NP_082218Link to BLAST:NP_082218.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_082218.1 408 Q9DAF3 408 100% 0 0

Chromosomal Locations for CCDS 40527.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 6265141 6266367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1227 nt):
ATGCTGATCACTGTGTATTGTGTGCGTAGGGACCTCACAGAGGTAACCTTTTCCCTCCAGGTCAACCCTG
AC
TTTGAGCTCTCAAACTTCAGAGTCCTCTGTGAGCTTGAGTCTGGTGTGCCTGCTGAGGAGGCCCAGAT
C
GTTTACATGGAACAGCTCCTCACAGATGACCACTGCTCCCTGGGCTCCTATGGACTCAAAGATGGTGAC
ATG
GTTGTACTTCTTCAGAAGGATAATGTTGGACTTCGGACTCCAGGAAGGACTCCAAACCATCCTCGAG
CA
GATTTCACTGGGTCTGGGTCGGCCGTGCCTGGAACATCAAGTTCCCGACACCCGCATCAGCATCAACA
C
CATTATCACCATCATCAACGTATACCATCAACACAGCAAGCCCACGGATTAGCCTCTGGAGAGAATATG
ACC
TTTGCTCAGGAACTCGACAGCCCTGCCCTGATTCGAAGCATGCTGCTTTCCAACCCCCATGATCTGT
CC
CTGTTGAAGGAACGGAATCCTGCTTTGGCTGAAGCTCTGCTTAGTGGAAACCTTGAGACATTTTCTCA
G
GTCCTGATGGAGCAGCAGAGAGAAAGGACCTTGAGAGAGCAAGAGATGTTTCGTCTTTACTCTACTAAC
CCA
TTTGATCAGGAAACTCAGGCTAGAATAGAAGAAGAAATCCGACAACAGAATATTGAAGAAAATATGA
AC
ATAGCTATGGAAGAGGCTCCGGAGAGTTTTGGACAAGTCGCTATGCTCTATATTAACTGCAAAGTGAA
T
GGGCATCCTTTAAAGGCTTTTGTTGACTCTGGTGCCCAGATGACTATCATGAGCCAAGCTTGTGCTGAG
AGA
TGTAATATTATGAGACTGGTAGACCGACGGTGGGGTGGGGTTGCTAAGGGAGTAGGCACACAGAGGA
TT
ATGGGCCGCGTTCATCTGGCTCAGATTCAAATTGAAGGTGATTTCTTACAGTGCTCTTTCTCTATACT
T
GAAGAGCAGCCCATGGATATCCTTCTAGGGCTTGATATGCTCAGGAGGCACCAGTGTTCCATCGACCTA
AAG
AAAAATGTGCTGGTGATTGGCACTACCGGCTCACAGACTCACTTCCTTCCTGAAGGAGAGTTGCCCT
TG
TGTGCTAAACTGTTGAGTGGAACTGTACAAGAAGAGTCTTCAGACAGGGAAGTAGGAGGTACTATCAA
A
CACCCTGTCAAGGGTCCTGGACGTAAAAAGCATTGA


Translation (408 aa):
MLITVYCVRRDLTEVTFSLQVNPDFELSNFRVLCELESGVPAEEAQIVYMEQLLTDDHCSLGSYGLKDGD
M
VVLLQKDNVGLRTPGRTPNHPRADFTGSGSAVPGTSSSRHPHQHQHHYHHHQRIPSTQQAHGLASGENM
T
FAQELDSPALIRSMLLSNPHDLSLLKERNPALAEALLSGNLETFSQVLMEQQRERTLREQEMFRLYSTN
P
FDQETQARIEEEIRQQNIEENMNIAMEEAPESFGQVAMLYINCKVNGHPLKAFVDSGAQMTIMSQACAE
R
CNIMRLVDRRWGGVAKGVGTQRIMGRVHLAQIQIEGDFLQCSFSILEEQPMDILLGLDMLRRHQCSIDL
K
KNVLVIGTTGSQTHFLPEGELPLCAKLLSGTVQEESSDREVGGTIKHPVKGPGRKKH




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
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  VEGA Genome Browser