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Report for CCDS40691.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40691.1 Public Mus musculus 9 Myo5c 23 108 98 CCDS HistoryNCBI Gene:208943Re-query CCDS DB by CCDS ID:40691.1Re-query CCDS DB by GeneID:208943See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 40691.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000036555.7 ENSMUSP00000042229.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000036555.7Link to Ensembl Protein Viewer:ENSMUSP00000042229.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000036555Re-query CCDS DB by Protein ID:ENSMUSP00000042229
Original member Current member NCBI NM_001081322.1 NP_001074791.1 Accepted alive Link to Nucleotide Sequence:NM_001081322.1Link to Protein Sequence:NP_001074791.1Re-query CCDS DB by Nucleotide ID:NM_001081322Re-query CCDS DB by Protein ID:NP_001074791Link to BLAST:NP_001074791.1

Chromosomal Locations for CCDS 40691.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 75232149 75232175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75242762 75242872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75244970 75245135 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75246138 75246282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75249733 75249889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75250373 75250516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75251441 75251522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75252524 75252631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75255831 75255937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75257959 75258224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75262208 75262289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75262985 75263125 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75266068 75266193 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75267025 75267108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75269521 75269655 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75270269 75270366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75271543 75271629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75272845 75272956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75273509 75273720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75275471 75275636 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75275902 75276048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75276932 75277096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75278225 75278318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75279336 75279399 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75281836 75282016 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75283893 75283986 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75284147 75284210 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75284933 75285013 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75286411 75286591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75288049 75288142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75288893 75288956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75289059 75289227 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75290849 75290936 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75292154 75292252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75293926 75294080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75295162 75295251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75296010 75296160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75297404 75297686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75300806 75300980 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75301404 75301484 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75303930 75304082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5229 nt):
ATGGCGGTGGCCGAGCTCTACGCGCAGTACAACAGGGTTTGGATCCCAGATCCTGAGGAAGTTTGGAAGT
CGGCTGAAATCGCAAAGGACTACAGAGCGGGTGACCGAGTCCTCAGACTTCTGCTGGAGGATGGCATGGA
GCTGGAATACCCTGTTGACCCAGGGTCACTGCCTCCGCTTCGGAACCCTGACATCCTGGTGGGTGAGAAT
GACCTCACAGCCCTCAGCTACCTCCATGAGCCCGCAGTGCTGCATAATCTCAGAATCCGCTTCGCAGAGT
CCAAACTCATCTACACCTACAGTGGAATCATTTTGGTGGCCATGAATCCTTACAAACAGCTACCAATATA
CGGGGATGCCATCATCCACGCCTACAGCGGACAGAACATGGGTGACATGGACCCACACATCTTTGCGGTT
GCAGAGGAGGCCTACAAGCAGATGGCCAGGAACAATAGAAATCAGTCCATAATCGTGAGTGGAGAATCAG
GAGCCGGGAAGACTGTCTCTGCACGCTATGCCATGAGGTACTTCGCTACCGTCAGCAAATCGAGCAGCAA
TGCCCATGTGGAGGACAAAGTCTTGGCATCCAATCCCATAACTGAGGCTGTTGGAAATGCCAAGACCACC
CGCAATGACAACAGCAGTCGGTTTGGGAAATACACAGAGATCAGCTTTGATGAGAGAAACCAGATCATTG
GCGCCAATATGAGAACTTACCTCCTGGAGAAGTCCAGAGTTGTCTTTCAGTCAGAAAATGAACGGAATTA
CCACATCTTCTACCAGCTTTGTGCATCCGCACAGCAGTCAGAATTTAAACACCTTAAACTGGGGAGTGCG
GAAGAGTTCAACTACACAAGAATGGGAGGTAACACTGTCATTGAAGGTGTCAATGACAGAGCTGACATGG
TGGAGACCCAGAAGACCTTCACACTACTGGGATTCAAGAAAGATTTTCAAATGGATGTTTTTAAGATCCT
AGCTGCCATCCTGCACCTGGGCAATGTGCAGGTCACCACGGTGGGCAACGAGAGGTCTTCAGTCAGTGAG
GATGACAGTCACCTGAAGGTGTTCTGTGAGCTCTTGGGCCTGGAGACCAGCAAAGTGGCTCAGTGGCTGT
GCAACAGAAAAATTGTGACCTCCTCGGAAACTGTGGTAAAGCCCATGACCAGGCCTCAGGCCATCAACGC
CAGGGATGCGCTGGCCAAAAAGATCTACGCTCACCTGTTCGACTTCATTGTCGAGCAAATCAACCAGGCG
TTGCACTTCTCAGGCAAGCAGCACACTTTTATTGGTGTTTTGGACATTTATGGTTTTGAGACCTTTGATG
TAAACAGCTTTGAACAGTTCTGCATCAATTACGCTAATGAAAAACTACAGCAGCAGTTTAACCTGCACGT
CTTTAAACTTGAGCAAGAGGAATACATGAAAGAGGACATCCCCTGGACTCTGATAGACTTCTATGACAAC
CAGCCTGTTATTGACCTGATCGAGGCAAAAATGGGCATTTTGGAGTTGCTGGATGAAGAATGCTTGTTGC
CTCATGGCACCGATGAAAACTGGCTTCAAAAGCTGTATAACAATTTTGTCAACAAGAACTCGTTATTCGA
GAAGCCTAGAATGTCAAACTCATCCTTCATCATCCAACATTTTGCTGACAAGGTGGAGTACCAATGTGAA
GGGTTCCTGGAGAAGAACAGAGACACTGTCTATGACATGCTGGTGGAGATCCTCAGAGCAAGCAAGTTTC
ATCTCTGTGCCGCCTTTTTTCAAGAAAGCCCTGTTCCGTCTTCTCCCTTTGGGGCGATGATCACAGTTAA
ATCTGCAAAGCAGGTCATCAAGCCGAACACCAAGCACTTCCGGACCACTGTTGGGAACAAGTTCCGCAGC
TCTCTGTACTTGCTCATGGAAACCCTCAATGCCACCACACCCCACTACGTCCGTTGCATCAAGCCAAATG
ATGAGAAAATGCCCTTTGAGTTTGACTCCAAGCGGATTGTCCAGCAGCTGCGAGCCTGTGGCGTTTTAGA
AACGATTCGCATCAGTGCCCAGAGCTACCCTTCCAGGTGGACATACCTCGAGTTCTATAGTCGCTATGGC
ATCCTCATGACCCAGCAGGAGCTGTCCCTCAGTGATAAGAAGGAGGTGTGCAAGGTGGTTCTGCACAGGC
TCATCCAGGATTCTAACCAGTACCAGTTTGGTAGAACCAAAATTTTCTTCAGAGCAGGACAAGTGGCTTA
CTTAGAGAAACTCCGCCTGGATAAACTGAGACAGGATTGTATTATGATCCAGAAACACGTGCGAGGCTGG
CTGCAGAGGAGGAAGTTCCTCAGGGAGAGACAGGCTGCCCTGACAATCCAACGGTACTTCCGGGGTCAGC
AGACAGTGAGGAAGGCCATCACTGCCACTGCTTTGAAGGAGGCCTGGGCGGCCATCATCCTCCAGAAGTA
TTGCCGAGGCTACCTGGTCCGTAACCTGTACCAGCTGATCCGTGTGGCCACCATCACCATCCAGGCACAC
ACCAGGGGCTTCCTAGCCAGGAGGCGGTACCGGAAGTTGTTGCAGGAGCACAAGGCAGTGATCCTGCAGA
AGTATGCGAGGGCCTGGCTGGCCCGGCGCAGATTCCAGAACATCCGCAGGTTCGTGCTCAACATTCAGCT
GACTTACAGGGTCCAGCGCTTGCAGAAGAAGCTGGAGGATCAGAACAGAGAGAACCACGGGCTGGTGGAG
AAGCTGACCAGCCTGGCCGCTCTGCGGGTTGGCGATCTGGAAAAGGTTCAGAAGCTGGAAGCAGAGCTGG
AAAAGGCAGCTACCCACCGGCACAGCTATGAAGAGAAGGGCCGCAGATACAGGGACACAGTGGAGGAGAG
GTTGTCAAAGCTGCAGAAGCACAATGCAGAGCTGGAGCTGCAGAGAGAGCGAGCAGAGCAGATGCTGCAA
GAGAAGTCTGAGGAGCTAAAAGAAAAAATGGACAAGCTCACCAGGCAGCTGTTTGATGATGTGCAGAAAG
AAGAACAGCAAAGACTAGTTCTTGAAAAAGGTTTTGAGCTGAAAACACAAGCCTATGAGAAACAGATAGA
GTCTCTGAGAGAAGAGATTAAAGCCCTCAAGGACGAGAGGTCGCAACTGCATCACCAGCTGGAGGAGGGA
CAGGTCACCTCTGACCGCCTGAAGGGGGAGGTGGCCCGCCTAAGCAAGCAGGCAAAGACCATCTCTGAGT
TTGAGAAGGAGATAGAGCTGCTGCAAGCCCAGAAGATAGATGTGGAAAAGCACGTGCAGTCACAGAAACG
GGAGATGAGAGAACGGATGTCAGAGGTCACCAAGCAGCTTTTGGAGAGCTATGACATCGAAGATGTTAGA
AGCAGGCTCTCTGTGGAAGATCTGGAACATTTAAATGAAGATGGAGAACTTTGGTTTGCCTACGAAGGAC
TAAAGAAAGCAACTCGAGTTCTGGAGAGCCATTTCCAGTCTCAGAAGGATTGCTATGAAAAAGAGATTGA
AGGTCTGAACTTCAAAGTCGTGCACCTGAGCCAAGAGATCAACCACCTGCAGAAGCTGTTCAGAGAAGAG
ACAGACATCAACGAAAGTATCCGGCATGAAGTCACCAGGCTGACATCAGAAAACATGATGATCCCAGACT
TTAAGCAGCAGATTTCAGAGCTGGAGAGGCAGAAGCAGGATCTTGAATCCCGCCTGAAGGAGCAGGCTGA
GAAGATAGAAGGAAAGCTGGAAGAGCCGTTCAGCCACCTGAACCGAATCCGAGAAGAGGAGAGAATGCAG
GGCAGGGCCGTGGAAGCACAGAGTGAGATGCATCCAGAAGGGAAGGAGAGGCTGGTGGGTGCGATCCACG
AACCGCATGAAGCCATCAAGTTCCCAAAGAAGCAACCAGAAGCTGAGGAGGAAGTCGAGAGTATTCTCCA
ACAAGAAGCGTCCCGGCTCTCTTTGGAAAAGAGGGATCTCGAGGAAGAGTTAGACATGAAGGACAGAATG
ATTAGAAGGCTACAAGATCAAGTCAAGACTCTGACCAAGACGACTGAGAAAGCCAACCATGTGCACCTGC
CCTCGGGATCCAGGGAGTACCTGGGGATGCTGGAATACAAGAAAGAAGATGAGGGGAAGCTCATTCAAAA
CCTCATTCTTGACCTGAAGCCCCGAGGTGTGGTGGTGAACATGATCCCAGGGCTGCCAGCTCACATCCTG
TTCATGTGCGTGCGATACGCGGACTCCCTAAACGACGCCAACATGCTCAAATCCCTCATGAACAGTGCTA
TTAACGGCATCAAGCATGTGGTTAAGGAACATTTTGAAGATTTGGAGATGCTGTCCTTCTGGCTTTCCAA
CACTTGCCATTTTCTTAACTGCCTGAAGCAGTACAGCGGAGAAGAGGAATTCATGAAGTATAACAGCCCA
CAGCAGAATAAGAACTGCTTGAACAATTTTGATCTTACAGAATACAGACAGATTCTCAGTGATGTGGCCA
TACGGATTTATCATCAGTTCATCATTGTGATGGAAAACAACCTCCAGCCGATAATAGTGCCAGGCATGCT
GGAGTATGAGAGCCTGCAGGGCATTTCCGGCCTGAAGCCCACTGGTTTCCGGAAGCGCTCATCCAGCATC
GACGACACAGATGCCTACACCATGACGTCCATCCTGCAGCAGCTGAGCTACTTCTACAGCACCATGTGTC
AGAACGGCCTGGACCCCGAGATTGTGAGGCAGGCGGTCAAGCAGTTGTTCTACCTGGTCGGGGCGGTGAC
CCTCAACAGCCTCCTCCTGCGCAAGGACATGTGCTCCTGCAGGAAAGGCATGCAGATCAGGTGCAACATC
AGCTTCTTGGAAGAATGGCTAAAAGATAAGAATGTGCAGAGTAGCTTAGCCAAGGAGACACTGGAGCCCC
TCTCTCAGGCAGCCTGGTTGCTGCAGGTGAAGAAGACCACAGACAGTGATGCCAAGGAGATCGCCCAGTG
TTGCACTTCCCTGTCTGCTGTGCAGATCATAAAGATCCTTAATTCATACACACCTATAGACGACTTCGAG
AAAAGAGTCAATCCATCCTTCGTCCGCAAAGTACAGGCTCTTCTGAATAACCGGGGCGACTCGGCACAGC
TGATGCTGGATACCAAATATCTTTTTCAAGTCACATTTCCTTTCACCGCCTCACCACACGCCCTGGAGAT
GACCCAGATCCCCAGCAGCTTCAAGCTCGGCTTTCTCCGGAGACTGTAG

Translation (1742 aa):
MAVAELYAQYNRVWIPDPEEVWKSAEIAKDYRAGDRVLRLLLEDGMELEYPVDPGSLPPLRNPDILVGEN
DLTALSYLHEPAVLHNLRIRFAESKLIYTYSGIILVAMNPYKQLPIYGDAIIHAYSGQNMGDMDPHIFAV
AEEAYKQMARNNRNQSIIVSGESGAGKTVSARYAMRYFATVSKSSSNAHVEDKVLASNPITEAVGNAKTT
RNDNSSRFGKYTEISFDERNQIIGANMRTYLLEKSRVVFQSENERNYHIFYQLCASAQQSEFKHLKLGSA
EEFNYTRMGGNTVIEGVNDRADMVETQKTFTLLGFKKDFQMDVFKILAAILHLGNVQVTTVGNERSSVSE
DDSHLKVFCELLGLETSKVAQWLCNRKIVTSSETVVKPMTRPQAINARDALAKKIYAHLFDFIVEQINQA
LHFSGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDIPWTLIDFYDN
QPVIDLIEAKMGILELLDEECLLPHGTDENWLQKLYNNFVNKNSLFEKPRMSNSSFIIQHFADKVEYQCE
GFLEKNRDTVYDMLVEILRASKFHLCAAFFQESPVPSSPFGAMITVKSAKQVIKPNTKHFRTTVGNKFRS
SLYLLMETLNATTPHYVRCIKPNDEKMPFEFDSKRIVQQLRACGVLETIRISAQSYPSRWTYLEFYSRYG
ILMTQQELSLSDKKEVCKVVLHRLIQDSNQYQFGRTKIFFRAGQVAYLEKLRLDKLRQDCIMIQKHVRGW
LQRRKFLRERQAALTIQRYFRGQQTVRKAITATALKEAWAAIILQKYCRGYLVRNLYQLIRVATITIQAH
TRGFLARRRYRKLLQEHKAVILQKYARAWLARRRFQNIRRFVLNIQLTYRVQRLQKKLEDQNRENHGLVE
KLTSLAALRVGDLEKVQKLEAELEKAATHRHSYEEKGRRYRDTVEERLSKLQKHNAELELQRERAEQMLQ
EKSEELKEKMDKLTRQLFDDVQKEEQQRLVLEKGFELKTQAYEKQIESLREEIKALKDERSQLHHQLEEG
QVTSDRLKGEVARLSKQAKTISEFEKEIELLQAQKIDVEKHVQSQKREMRERMSEVTKQLLESYDIEDVR
SRLSVEDLEHLNEDGELWFAYEGLKKATRVLESHFQSQKDCYEKEIEGLNFKVVHLSQEINHLQKLFREE
TDINESIRHEVTRLTSENMMIPDFKQQISELERQKQDLESRLKEQAEKIEGKLEEPFSHLNRIREEERMQ
GRAVEAQSEMHPEGKERLVGAIHEPHEAIKFPKKQPEAEEEVESILQQEASRLSLEKRDLEEELDMKDRM
IRRLQDQVKTLTKTTEKANHVHLPSGSREYLGMLEYKKEDEGKLIQNLILDLKPRGVVVNMIPGLPAHIL
FMCVRYADSLNDANMLKSLMNSAINGIKHVVKEHFEDLEMLSFWLSNTCHFLNCLKQYSGEEEFMKYNSP
QQNKNCLNNFDLTEYRQILSDVAIRIYHQFIIVMENNLQPIIVPGMLEYESLQGISGLKPTGFRKRSSSI
DDTDAYTMTSILQQLSYFYSTMCQNGLDPEIVRQAVKQLFYLVGAVTLNSLLLRKDMCSCRKGMQIRCNI
SFLEEWLKDKNVQSSLAKETLEPLSQAAWLLQVKKTTDSDAKEIAQCCTSLSAVQIIKILNSYTPIDDFE
KRVNPSFVRKVQALLNNRGDSAQLMLDTKYLFQVTFPFTASPHALEMTQIPSSFKLGFLRRL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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