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Report for CCDS4086.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4086.1 Public Homo sapiens 5 ERAP2 24 110 108 CCDS HistoryNCBI Gene:64167Re-query CCDS DB by CCDS ID:4086.1Re-query CCDS DB by GeneID:64167See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4086.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000437043.8 ENSP00000400376.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000437043.8Link to Ensembl Protein Viewer:ENSP00000400376.3Re-query CCDS DB by Nucleotide ID:ENST00000437043Re-query CCDS DB by Protein ID:ENSP00000400376
Original member Current member NCBI NM_001130140.2 NP_001123612.1 Accepted alive Link to Nucleotide Sequence:NM_001130140.2Link to Protein Sequence:NP_001123612.1Re-query CCDS DB by Nucleotide ID:NM_001130140Re-query CCDS DB by Protein ID:NP_001123612Link to BLAST:NP_001123612.1
Original member Current member NCBI NM_022350.5 NP_071745.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_022350.5Link to Protein Sequence:NP_071745.1Re-query CCDS DB by Nucleotide ID:NM_022350Re-query CCDS DB by Protein ID:NP_071745Link to BLAST:NP_071745.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001123612.1 960 Q6P179-1 960 100% 0 0
NP_071745.1 960 Q6P179-1 960 100% 0 0

Chromosomal Locations for CCDS 4086.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 96879686 96880260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 96883792 96883930 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 96886655 96886789 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 96889185 96889305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 96892299 96892453 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 96895246 96895359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 96896373 96896504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 96896732 96896863 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 96900121 96900189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 96901506 96901681 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 96902274 96902353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 96903377 96903560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 96908961 96909117 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 96909580 96909764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 96912637 96912798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 96913317 96913457 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 96915688 96915769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 96917462 96917605 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2883 nt):
ATGTTCCATTCTTCTGCAATGGTTAATTCACACAGAAAACCAATGTTTAACATTCACAGAGGATTTTACT
GCTTAACAGCCATCTTGCCCCAAATATGCATTTGTTCTCAGTTCTCAGTGCCATCTAGTTATCACTTCAC
TGAGGATCCTGGGGCTTTCCCAGTAGCCACTAATGGGGAACGATTTCCTTGGCAGGAGCTAAGGCTCCCC
AGTGTGGTCATTCCTCTCCATTATGACCTCTTTGTCCACCCCAATCTCACCTCTCTGGACTTTGTTGCAT
CTGAGAAGATCGAAGTCTTGGTCAGCAATGCTACCCAGTTTATCATCTTGCACAGCAAAGATCTTGAAAT
CACGAATGCCACCCTTCAGTCAGAGGAAGATTCAAGATACATGAAACCAGGAAAAGAACTGAAAGTTTTG
AGTTACCCTGCTCATGAACAAATTGCACTGCTGGTTCCAGAGAAACTTACGCCTCACCTGAAATACTATG
TGGCTATGGACTTCCAAGCCAAGTTAGGTGATGGCTTTGAAGGGTTTTATAAAAGCACATACAGAACTCT
TGGTGGTGAAACAAGAATTCTTGCAGTAACAGATTTTGAGCCAACCCAGGCACGCATGGCTTTCCCTTGC
TTTGATGAACCGTTGTTCAAAGCCAACTTTTCAATCAAGATACGAAGAGAGAGCAGGCATATTGCACTAT
CCAACATGCCAAAGGTTAAGACAATTGAACTTGAAGGAGGTCTTTTGGAAGATCACTTTGAAACTACTGT
AAAAATGAGTACATACCTTGTAGCCTACATAGTTTGTGATTTCCACTCTCTGAGTGGCTTCACTTCATCA
GGGGTCAAGGTGTCCATCTATGCATCCCCAGACAAACGGAATCAAACACATTATGCTTTGCAGGCATCAC
TGAAGCTACTTGATTTTTATGAAAAGTACTTTGATATCTACTATCCACTCTCCAAACTGGATTTAATTGC
TATTCCTGACTTTGCACCTGGAGCCATGGAAAATTGGGGCCTCATTACATATAGGGAGACGTCACTGCTT
TTTGACCCCAAGACCTCTTCTGCTTCCGATAAACTGTGGGTCACCAGAGTCATAGCCCATGAACTGGCGC
ACCAGTGGTTTGGCAACCTGGTCACAATGGAATGGTGGAATGATATTTGGCTTAAGGAGGGTTTTGCAAA
ATACATGGAACTTATCGCTGTTAATGCTACATATCCAGAGCTGCAATTTGATGACTATTTTTTGAATGTG
TGTTTTGAAGTAATTACAAAAGATTCATTGAATTCATCCCGCCCTATCTCCAAACCAGCGGAAACCCCGA
CTCAAATACAGGAAATGTTTGATGAAGTTTCCTATAACAAGGGAGCTTGTATTTTGAATATGCTCAAGGA
TTTTCTGGGTGAGGAGAAATTCCAGAAAGGAATAATTCAGTACTTAAAGAAGTTCAGCTATAGAAATGCT
AAGAATGATGACTTGTGGAGCAGTCTGTCAAATAGTTGTTTAGAAAGTGATTTTACATCTGGTGGAGTTT
GTCATTCGGATCCCAAGATGACAAGTAACATGCTCGCCTTTCTGGGGGAAAATGCAGAGGTCAAAGAGAT
GATGACTACATGGACTCTCCAGAAAGGAATCCCCCTGCTGGTGGTTAAACAAGACGGGTGTTCACTCCGA
CTGCAACAGGAGCGCTTCCTCCAGGGGGTTTTCCAGGAAGACCCTGAATGGAGGGCCCTGCAGGAGAGGT
ACCTGTGGCATATCCCATTGACCTACTCCACGAGTTCTTCTAATGTGATCCACAGACACATTCTAAAATC
AAAGACAGATACTCTGGATCTACCTGAAAAGACCAGTTGGGTGAAATTTAATGTGGACTCAAATGGTTAC
TACATCGTTCACTATGAGGGTCATGGATGGGACCAACTCATTACACAGCTGAATCAGAACCACACACTTC
TCAGACCTAAGGACAGAGTAGGTCTGATTCATGATGTGTTTCAGCTAGTTGGTGCAGGGAGACTGACCCT
AGACAAAGCTCTTGACATGACTTACTACCTCCAACATGAAACAAGCAGCCCCGCACTTCTCGAAGGTCTG
AGTTACTTGGAATCGTTTTACCACATGATGGACAGAAGGAATATTTCAGATATCTCTGAAAACCTCAAGC
GTTACCTTCTTCAGTATTTTAAGCCAGTGATTGACAGGCAAAGCTGGAGTGACAAGGGCTCAGTCTGGGA
CAGGATGCTCCGCTCGGCTCTCTTGAAGCTGGCCTGTGACCTGAACCATGCTCCTTGCATCCAGAAAGCT
GCTGAACTCTTCTCCCAGTGGATGGAATCCAGTGGAAAATTAAATATACCAACAGATGTTTTAAAGATTG
TGTATTCTGTGGGTGCTCAGACAACAGCAGGATGGAATTACCTTTTAGAGCAATATGAACTGTCAATGTC
AAGTGCTGAACAAAACAAAATTCTGTATGCTTTGTCAACGAGCAAGCATCAGGAAAAGTTACTGAAGTTA
ATTGAACTAGGAATGGAAGGAAAGGTTATCAAGACACAGAACTTGGCAGCTCTCCTTCATGCGATTGCCA
GACGTCCAAAGGGGCAGCAACTAGCATGGGATTTTGTAAGAGAAAATTGGACCCATCTTCTGAAAAAATT
TGACTTGGGCTCATATGACATAAGGATGATCATCTCTGGCACAACAGCTCACTTTTCTTCCAAGGATAAG
TTGCAAGAGGTGAAACTATTTTTTGAATCTCTTGAGGCTCAAGGATCACATCTGGATATTTTTCAAACTG
TTCTGGAAACGATAACCAAAAATATAAAATGGCTGGAGAAGAATCTTCCGACTCTGAGGACTTGGCTAAT
GGTTAATACTTAA

Translation (960 aa):
MFHSSAMVNSHRKPMFNIHRGFYCLTAILPQICICSQFSVPSSYHFTEDPGAFPVATNGERFPWQELRLP
SVVIPLHYDLFVHPNLTSLDFVASEKIEVLVSNATQFIILHSKDLEITNATLQSEEDSRYMKPGKELKVL
SYPAHEQIALLVPEKLTPHLKYYVAMDFQAKLGDGFEGFYKSTYRTLGGETRILAVTDFEPTQARMAFPC
FDEPLFKANFSIKIRRESRHIALSNMPKVKTIELEGGLLEDHFETTVKMSTYLVAYIVCDFHSLSGFTSS
GVKVSIYASPDKRNQTHYALQASLKLLDFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWGLITYRETSLL
FDPKTSSASDKLWVTRVIAHELAHQWFGNLVTMEWWNDIWLKEGFAKYMELIAVNATYPELQFDDYFLNV
CFEVITKDSLNSSRPISKPAETPTQIQEMFDEVSYNKGACILNMLKDFLGEEKFQKGIIQYLKKFSYRNA
KNDDLWSSLSNSCLESDFTSGGVCHSDPKMTSNMLAFLGENAEVKEMMTTWTLQKGIPLLVVKQDGCSLR
LQQERFLQGVFQEDPEWRALQERYLWHIPLTYSTSSSNVIHRHILKSKTDTLDLPEKTSWVKFNVDSNGY
YIVHYEGHGWDQLITQLNQNHTLLRPKDRVGLIHDVFQLVGAGRLTLDKALDMTYYLQHETSSPALLEGL
SYLESFYHMMDRRNISDISENLKRYLLQYFKPVIDRQSWSDKGSVWDRMLRSALLKLACDLNHAPCIQKA
AELFSQWMESSGKLNIPTDVLKIVYSVGAQTTAGWNYLLEQYELSMSSAEQNKILYALSTSKHQEKLLKL
IELGMEGKVIKTQNLAALLHAIARRPKGQQLAWDFVRENWTHLLKKFDLGSYDIRMIISGTTAHFSSKDK
LQEVKLFFESLEAQGSHLDIFQTVLETITKNIKWLEKNLPTLRTWLMVNT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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