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Report for CCDS41197.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41197.1 Public Mus musculus X Adgrg2 23 108 98 CCDS HistoryNCBI Gene:237175Re-query CCDS DB by CCDS ID:41197.1Re-query CCDS DB by GeneID:237175See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41197.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000112402.7 ENSMUSP00000108021.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000112402.7Link to Ensembl Protein Viewer:ENSMUSP00000108021.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000112402Re-query CCDS DB by Protein ID:ENSMUSP00000108021
Original member Current member NCBI NM_001079857.2 NP_001073326.1 Accepted alive Link to Nucleotide Sequence:NM_001079857.2Link to Protein Sequence:NP_001073326.1Re-query CCDS DB by Nucleotide ID:NM_001079857Re-query CCDS DB by Protein ID:NP_001073326Link to BLAST:NP_001073326.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001073326.1 995 Q8CJ12-3 995 100% 0 0

Chromosomal Locations for CCDS 41197.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 160438196 160438313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160456005 160456037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160458835 160458882 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160461343 160461381 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160465578 160465631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160468892 160468947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160469768 160469823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160471756 160471795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160472312 160472349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160474704 160474798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160475491 160475557 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160477049 160477440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160478985 160479147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160480227 160480383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160481547 160481690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160482289 160482411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160483083 160483128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160483234 160483337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160484140 160484261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160485644 160485912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160487666 160487765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160488684 160488967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160491398 160491499 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160492600 160492752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160496305 160496489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2988 nt):
ATGCTTTTCTCTGGTGGGCAGTACAGCCCTGTTGGCAGACCTGAAGAGGTTTTACTGATATACAAGATAT
TCCTTGTCATCATTTGTTTTCATGTCATTCTCGTTACATCCCTGAAAGAAAACGGTAATTCCAGTTTGTT
ATCACCATCTGCTGAATCATCTCTTGTCAGTCTCATCCCCTACTCCAATGGTACACCAGATGCTGCTTCA
GAAGTTTTGTCGACTTTAAACAAAACAGGAGTCAAATCCCAGAGAAATATCTGCAATTTGTCATCTCTTT
GCAATGACTCAGTATTTTTTAGAGGTGAGATAGTGTTTCAACATGATGAAGACCACAATGTTACCCAGAA
TCAAGATACAGCTAATGGCACCTTCGCTGGAGTCCTGTCTCTAAGTGAACTGAAGCGATCAGAGCTCAAC
AAAACTCTACAGACCTTAAGTGAGACTTACTTTATAGTGTGTGCTACAGCAGAGGCCCAAAGCACGGTAA
ACTGTACATTCACAGTAAAACTCAATGAGACCATGAATGTGTGTGCCATGATGGTTACTTTCCAAACTGT
ACAGATTCGGCCAATGGAACAGTGCTGCTGTTCCCCGAGGACTCCCTGCCCTTCCTCACCAGAAGAGTTA
GAAAAACTACAGTGTGAACTGCAGGATCCCATTGTCTGTCTTGCTGATCAACCGCATGGCCCACCGTTAT
CGTCTTCCAGCAAGCCTGTTGTACCTCAGGCCACCATTATTTCCCATGTTGCTAGTGACTTCTCTTTGGC
TGAACCCCTTGATCATGCCCTTATGACCCCAAGCACACCCTCTCTGACACAAGAAAGTAACCTTCCATCT
CCTCAGCCTACGATCCCCCTGGCTTCCAGTCCTGCCACTGACTTGCCAGTTCAATCTGTAGTGGTCTCTT
CTTTGCCTCAAACTGATCTTTCCCACACCCTGTCACCGGTGCAGTCCTCCATTCCCTCTCCTACCACACC
AGCCCCATCTGTCCCTACAGAACTGGTCACCATCAGCACACCTCCTGGTGAGACAGTTGTCAACACTAGC
ACTGTTTCTGATCTGGAAGCCCAAGTATCCCAGATGGAGAAAGCTTTGTCTTTGGGTAGCTTAGAGCCTA
ATCTTGCAGGCGAAATGGTAAACCGAGTCAGCAAACTCCTTCACTCTCCACCTGCCTTGCTAGCCCCTCT
AGCTCAAAGGTTGCTAAAAGTGGTAGATGCCATTGGCTTACAGCTGAATTTTTCATCTACAACTATCAGT
CTAACTTCACCTTCTTTGGCTCTTGCTGTGATCAGAGTGAATGCCAGTAATTTCAATACCACGACTTTTG
CAGCCCAAGACCCAACAAATCTCCAGGTTTCTCTGGAAACCCCACCTCCTGAGAATAGTATTGGTGCCAT
TACTCTGCCCTCATCACTGATGAATAATTTGCCAGCTAATGATGTAGAATTGGCTTCAAGGATTCAGTTC
AATTTCTTTGAAACACCCGCCCTGTTTCAGGATCCTTCCCTGGAGAACCTCACTCTGATAAGCTATGTCA
TATCATCAAGTGTCACAAACATGACCATCAAGAACTTGACAAGAAACGTGACAGTCGCACTGAAACACAT
CAACCCAAGTCCGGATGACTTAACTGTGAAATGTGTATTCTGGGACTTGGGCAGAAATGGTGGCAAAGGA
GGTTGGTCATCTGATGGCTGTTCCGTCAAAGACAAGAGAATGAATGAAACCATCTGTACCTGTAGCCATC
TTACAAGTTTTGGCATCCTATTGGACCTATCTCGAACATCCTTACCACCAAGTCAAATGATGGCTCTGAC
ATTTATCACGTATATTGGCTGTGGGCTTTCATCAATTTTTCTGTCAGTTACTCTTGTAACCTACATCGCC
TTTGAAAAGATCCGGAGGGATTACCCCTCCAAAATCCTCATCCAGCTGTGTGCTGCCCTGCTTCTGCTCA
ACCTGATCTTCCTCCTAGACTCCTGGATTGCGCTGTATAATACCCGAGGTTTCTGCATTGCCGTGGCTGT
ATTTCTTCACTATTTTCTCTTGGTCTCATTCACATGGATGGGATTAGAAGCATTCCACATGTACCTAGCA
CTGGTCAAGGTGTTTAATACTTACATCCGAAAGTACATCCTTAAATTCTGCATTGTTGGCTGGGGCATAC
CAGCTGTGGTTGTGTCCATCGTCCTGACTATATCCCCAGATAACTATGGGATTGGATCCTATGGAAAATT
CCCCAATGGCACACCAGATGACTTTTGCTGGATCAACAGCAATGTGGTGTTCTATATCACGGTTGTGGGA
TATTTCTGTGTGATATTTCTACTGAACGTCAGCATGTTCATCGTGGTCTTGGTTCAGCTCTGTCGAATTA
AAAAGAAGAAGCAGCTGGGAGCCCAGCGCAAAACTAGTATTCAAGACCTCAGGAGTATCGCTGGCCTCAC
ATTTTTACTGGGAATTACTTGGGGCTTTGCCTTCTTTGCCTGGGGACCAGTTAATGTCACCTTCATGTAT
CTCTTTGCCATCTTTAACACCTTACAAGGGTTTTTCATATTCATTTTTTACTGTGCAGCAAAAGAGAATG
TCAGAAAACAGTGGAGGCGGTATCTTTGTTGTGGAAAATTACGGCTGGCTGAAAATTCTGACTGGAGTAA
AACTGCTACTAATGGTTTAAAGAAGCAGACTGTAAACCAAGGAGTATCCAGCTCTTCAAATTCCTTACAG
TCAAGCTGTAACTCCACTAACTCCACCACACTCCTAGTGAATAGTGATTGCTCAGTGCACGCAAGCGGGA
ATGGCAATGCATCTACCGAGAGGAATGGGGTTTCTTTCAGTGTTCAGAATGGAGACGTGTGCCTTCATGA
TCTCACTGGCAAACAGCATATGTTTAGTGACAAAGAGGACTCCTGCAATGGTAAAAGCCGGATAGCGCTC
AGAAGGACTTCGAAGCGGGGAAGCTTACACTTTATCGAGCAAATGTGA

Translation (995 aa):
MLFSGGQYSPVGRPEEVLLIYKIFLVIICFHVILVTSLKENGNSSLLSPSAESSLVSLIPYSNGTPDAAS
EVLSTLNKTGVKSQRNICNLSSLCNDSVFFRGEIVFQHDEDHNVTQNQDTANGTFAGVLSLSELKRSELN
KTLQTLSETYFIVCATAEAQSTVNCTFTVKLNETMNVCAMMVTFQTVQIRPMEQCCCSPRTPCPSSPEEL
EKLQCELQDPIVCLADQPHGPPLSSSSKPVVPQATIISHVASDFSLAEPLDHALMTPSTPSLTQESNLPS
PQPTIPLASSPATDLPVQSVVVSSLPQTDLSHTLSPVQSSIPSPTTPAPSVPTELVTISTPPGETVVNTS
TVSDLEAQVSQMEKALSLGSLEPNLAGEMVNRVSKLLHSPPALLAPLAQRLLKVVDAIGLQLNFSSTTIS
LTSPSLALAVIRVNASNFNTTTFAAQDPTNLQVSLETPPPENSIGAITLPSSLMNNLPANDVELASRIQF
NFFETPALFQDPSLENLTLISYVISSSVTNMTIKNLTRNVTVALKHINPSPDDLTVKCVFWDLGRNGGKG
GWSSDGCSVKDKRMNETICTCSHLTSFGILLDLSRTSLPPSQMMALTFITYIGCGLSSIFLSVTLVTYIA
FEKIRRDYPSKILIQLCAALLLLNLIFLLDSWIALYNTRGFCIAVAVFLHYFLLVSFTWMGLEAFHMYLA
LVKVFNTYIRKYILKFCIVGWGIPAVVVSIVLTISPDNYGIGSYGKFPNGTPDDFCWINSNVVFYITVVG
YFCVIFLLNVSMFIVVLVQLCRIKKKKQLGAQRKTSIQDLRSIAGLTFLLGITWGFAFFAWGPVNVTFMY
LFAIFNTLQGFFIFIFYCAAKENVRKQWRRYLCCGKLRLAENSDWSKTATNGLKKQTVNQGVSSSSNSLQ
SSCNSTNSTTLLVNSDCSVHASGNGNASTERNGVSFSVQNGDVCLHDLTGKQHMFSDKEDSCNGKSRIAL
RRTSKRGSLHFIEQM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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