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Report for CCDS41563.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41563.1 Public Homo sapiens 10 ARMH3 24 110 108 CCDS HistoryNCBI Gene:79591Re-query CCDS DB by CCDS ID:41563.1Re-query CCDS DB by GeneID:79591See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41563.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000370033.9 ENSP00000359050.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000370033.9Link to Ensembl Protein Viewer:ENSP00000359050.4Re-query CCDS DB by Nucleotide ID:ENST00000370033Re-query CCDS DB by Protein ID:ENSP00000359050
Original member Current member NCBI NM_024541.3 NP_078817.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024541.3Link to Protein Sequence:NP_078817.2Re-query CCDS DB by Nucleotide ID:NM_024541Re-query CCDS DB by Protein ID:NP_078817Link to BLAST:NP_078817.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_078817.2 689 Q5T2E6-1 689 100% 0 0

Chromosomal Locations for CCDS 41563.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 101847528 101847620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 101849776 101849892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 101889412 101889490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 101939863 101939938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 101956597 101956723 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 101957650 101957732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 101975212 101975300 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 101990551 101990611 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 101991969 101992038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 101993538 101993603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 101995297 101995355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 102001971 102002072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 102006540 102006633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 102009374 102009449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 102009977 102010023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 102011723 102011783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 102012833 102012876 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 102013968 102014024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 102023477 102023563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 102023675 102023749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 102025156 102025248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 102029638 102029745 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 102033026 102033172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 102033283 102033339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 102040013 102040114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2070 nt):
ATGGCACAGGTAGAGAAACGTGGAGGTTTGCTCCGGAAATCTTCAGCCTCCAAAAAACCACTGAAGGAAA
AAGTGGTGCTGATGTATGATGAGATCTTCATGACAGAGGACCCCAGTAAGTGCAGTCCTCGGTTTTGGGA
GGAGCTCTTTCTCATGAAGGTGAATTTAGAGTACCTAGAAGGCAAGCTGGAATCTCTTGATGGTGAGGAG
TTAATGAAGATCAAGGACAATATTAATTGCTTATTCCAACACTGCATCCAGGCTCTGGGAGAGGAGCATC
CAATTCGGGTTGTCAATGCATTGCAGACCCTGTGCGCACTCATTCGAGGAGTCCATCAAAAGAATAAGTC
TACCTCTGGGTTTGACATTATCAACATGCTGATGGGCTTTGACAAGGCGGAGCTGTGCATGAAGAACTTG
ATGGAGAGTTTGGATTCATTGCTTTGTGCAGAAGGTTCTGAAAGTCTGAAGAGTTTATGTCTGAAACTTC
TCCTTTGCTTAGTGACCGTGACAGATAACATCAGCCAGAACACTATTCTCGAGTATGTAATGATCAACAG
CATATTTGAAGCAATTTTACAGATACTTTCCCATCCCCCAAGTCGTAGGGAGCATGGGTATGATGCTGTC
GTCCTCTTGGCTTTGCTGGTGAACTATAGAAAATATGAGTCTGTGAATCCTTATATTGTGAAGCTGTCTA
TCGTGGATGATGAGGCCACACTCAATGGAATGGGACTTGTAATTGCTCAGGCTTTATCTGAGTACAACAG
GCAGTATAAAGACAAGGAAGAAGAACACCAAAGTGGTTTTTTCTCTGCTTTAACAAATATGGTGGGCAGC
ATGTTCATAGCAGATGCCCATGAGAAAATCTCAGTACAAACCAATGAGGCCATTCTTCTGGCACTTTATG
AAGCTGTTCATTTAAATCGCAACTTCATCACAGTATTAGCTCAGAGCCATCCAGAAATGGGCTTGGTGAC
GACCCCTGTCAGTCCTGCTCCTACAACCCCAGTCACACCACTTGGGACCACACCGCCTTCCTCTGATGTT
ATAAGTTCTGTGGAACTCCCACTGGATGCAGATGTACAGACCAGTAATCTACTGATAACCTTTTTAAAGT
ATAGCTCAATTGTCATGCAGGACACCAAAGATGAACACAGGCTTCACAGTGGCAAACTCTGTCTGATTAT
CCTTACATGTATTGCAGAGGATCAATATGCCAATGCATTTTTGCATGATGACAACATGAATTTTCGAGTA
AACTTACATAGAATGCCTATGAGACACAGGAAGAAGGCAGCAGACAAGAATCTTCCCTGCCGTCCTTTAG
TATGTGCAGTACTGGACCTGATGGTAGAGTTTATTGTAACACACATGATGAAGGAGTTTCCTATGGATCT
CTATATACGCTGCATCCAGGTAGTACACAAACTGCTCTGCTACCAGAAGAAGTGTCGGGTACGCCTGCAT
TACACCTGGCGGGAGCTCTGGTCAGCCTTGATAAATTTGCTGAAGTTCCTTATGTCAAATGAGACTGTAC
TTTTGGCCAAACACAACATTTTTACATTAGCCCTTATGATTGTGAACCTATTTAATATGTTTATCACATA
TGGCGACACATTTCTGCCAACCCCCAGCAGCTATGATGAACTTTACTATGAGATTATCCGCATGCACCAG
AGCTTTGACAACCTCTACTCCATGGTCCTGAGGCTTTCTACCAATGCAGGCCAGTGGAAGGAAGCAGCTA
GCAAGGTGACCCATGCATTGGTTAATATCAGAGCCATCATCAACCACTTTAACCCCAAAATTGAGTCCTA
CGCTGCTGTGAATCACATATCCCAACTGTCAGAGGAGCAGGTGCTGGAGGTGGTGAGAGCCAACTATGAC
ACGCTCACGCTGAAGCTGCAGGATGGCCTGGACCAGTATGAGCGCTACTCAGAGCAGCACAAGGAAGCTG
CCTTCTTCAAAGAGCTGGTTCGATCCATTAGCACCAACGTCCGGAGAAACCTGGCCTTCCACACACTCAG
CCAAGAAGTCCTGCTCAAGGAGTTCTCCACTATCTCCTGA

Translation (689 aa):
MAQVEKRGGLLRKSSASKKPLKEKVVLMYDEIFMTEDPSKCSPRFWEELFLMKVNLEYLEGKLESLDGEE
LMKIKDNINCLFQHCIQALGEEHPIRVVNALQTLCALIRGVHQKNKSTSGFDIINMLMGFDKAELCMKNL
MESLDSLLCAEGSESLKSLCLKLLLCLVTVTDNISQNTILEYVMINSIFEAILQILSHPPSRREHGYDAV
VLLALLVNYRKYESVNPYIVKLSIVDDEATLNGMGLVIAQALSEYNRQYKDKEEEHQSGFFSALTNMVGS
MFIADAHEKISVQTNEAILLALYEAVHLNRNFITVLAQSHPEMGLVTTPVSPAPTTPVTPLGTTPPSSDV
ISSVELPLDADVQTSNLLITFLKYSSIVMQDTKDEHRLHSGKLCLIILTCIAEDQYANAFLHDDNMNFRV
NLHRMPMRHRKKAADKNLPCRPLVCAVLDLMVEFIVTHMMKEFPMDLYIRCIQVVHKLLCYQKKCRVRLH
YTWRELWSALINLLKFLMSNETVLLAKHNIFTLALMIVNLFNMFITYGDTFLPTPSSYDELYYEIIRMHQ
SFDNLYSMVLRLSTNAGQWKEAASKVTHALVNIRAIINHFNPKIESYAAVNHISQLSEEQVLEVVRANYD
TLTLKLQDGLDQYERYSEQHKEAAFFKELVRSISTNVRRNLAFHTLSQEVLLKEFSTIS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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