NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS41919.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41919.1 Public Homo sapiens 14 RBM23 24 110 108 CCDS HistoryNCBI Gene:55147Re-query CCDS DB by CCDS ID:41919.1Re-query CCDS DB by GeneID:55147See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41919.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000346528.9 ENSP00000339220.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000346528.9Link to Ensembl Protein Viewer:ENSP00000339220.5Re-query CCDS DB by Nucleotide ID:ENST00000346528Re-query CCDS DB by Protein ID:ENSP00000339220
Original member Current member NCBI NM_001077352.2 NP_001070820.1 Accepted alive Link to Nucleotide Sequence:NM_001077352.2Link to Protein Sequence:NP_001070820.1Re-query CCDS DB by Nucleotide ID:NM_001077352Re-query CCDS DB by Protein ID:NP_001070820Link to BLAST:NP_001070820.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001070820.1 405 Q86U06-4 405 100% 0 0

Chromosomal Locations for CCDS 41919.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 22901730 22901733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 22901814 22901883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 22901980 22902099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 22902187 22902382 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 22904261 22904326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 22904875 22905012 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 22905094 22905246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 22905336 22905453 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 22906195 22906368 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 22909483 22909595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 22911328 22911393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1218 nt):
ATGGCATCTGATGACTTTGACATAGTGATTGAGGCCATGCTGGAAGCTCCCTATAAAAAAGAAGAGGATG
AGCAACAAAGGAAAGAAGTTAAAAAGGATTATCCTAGCAATACCACCAGCAGCACCAGCAACAGTGGCAA
TGAGACCAGTGGAAGCAGCACCATCGGGGAGACAAGCAATCGTAGTCGAGATCGGGATCGGTATAGACGG
AGAAATAGTCGGAGCCGAAGTCCAGGTCGGCAGTGTCGTCACCGTAGCCGTAGCTGGGATCGTCGACATG
GTAGTGAGTCGCGAAGTCGGGACCATCGTCGTGAGGATCGTGTGCATTACAGGAGTCCTCCACTTGCCAC
TGGGGAGCCAGTTGATAATCTGAGTCCTGAGGAGCGTGATGCCCGCACAGTTTTCTGTATGCAGTTAGCT
GCCCGAATTCGGCCTCGAGATCTGGAGGACTTTTTCTCTGCTGTAGGCAAGGTTCGCGATGTACGTATCA
TCTCAGATCGGAACTCACGTCGTTCTAAGGGCATTGCCTACGTGGAATTCTGTGAAATCCAGTCTGTGCC
ACTGGCCATTGGGCTGACTGGGCAGCGGTTGCTGGGAGTGCCTATCATTGTACAGGCTTCACAGGCAGAG
AAAAACCGACTGGCAGCCATGGCCAACAACCTGCAAAAGGGCAATGGTGGACCAATGCGCCTCTATGTGG
GTTCCCTGCACTTCAATATCACTGAAGACATGCTCCGGGGCATCTTTGAGCCCTTTGGTAAAATTGATAA
TATTGTCCTGATGAAGGACTCAGATACAGGCCGCTCTAAAGGTTATGGTTTCATCACGTTCTCTGATTCT
GAGTGTGCCCGGCGGGCCCTGGAACAGTTGAATGGGTTTGAGCTTGCTGGTCGACCTATGAGGGTTGGCC
ATGTGACTGAGCGACTGGATGGTGGCACAGACATCACTTTTCCTGATGGGGACCAGGAGCTGGATCTGGG
ATCAGCAGGTGGACGTTTTCAGCTCATGGCAAAACTGGCAGAAGGCGCTGGAATCCAACTGCCAAGCACT
GCTGCTGCTGCTGCTGCCGCCGCCGCCCAGGCTGCTGCCTTGCAACTGAATGGAGCAGTTCCCTTGGGGG
CCCTGAATCCAGCAGCTCTGACTGCTCTGAGTCCAGCCCTGAACCTTGCCTCCCAGTGTTTCCAGCTCTC
CAGCCTCTTTACCCCCCAGACCATGTAA

Translation (405 aa):
MASDDFDIVIEAMLEAPYKKEEDEQQRKEVKKDYPSNTTSSTSNSGNETSGSSTIGETSNRSRDRDRYRR
RNSRSRSPGRQCRHRSRSWDRRHGSESRSRDHRREDRVHYRSPPLATGEPVDNLSPEERDARTVFCMQLA
ARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAE
KNRLAAMANNLQKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDS
ECARRALEQLNGFELAGRPMRVGHVTERLDGGTDITFPDGDQELDLGSAGGRFQLMAKLAEGAGIQLPST
AAAAAAAAAQAAALQLNGAVPLGALNPAALTALSPALNLASQCFQLSSLFTPQTM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH