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Report for CCDS42215.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42215.1 Public Homo sapiens 16 BANP 24 110 108 CCDS HistoryNCBI Gene:54971Re-query CCDS DB by CCDS ID:42215.1Re-query CCDS DB by GeneID:54971See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42215.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000355022.8 ENSP00000347125.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000355022.8Link to Ensembl Protein Viewer:ENSP00000347125.4Re-query CCDS DB by Nucleotide ID:ENST00000355022Re-query CCDS DB by Protein ID:ENSP00000347125
Original member Current member NCBI NM_001384916.1 NP_001371845.1 Accepted alive Link to Nucleotide Sequence:NM_001384916.1Link to Protein Sequence:NP_001371845.1Re-query CCDS DB by Nucleotide ID:NM_001384916Re-query CCDS DB by Protein ID:NP_001371845Link to BLAST:NP_001371845.1
Original member Current member NCBI NM_017869.4 NP_060339.2 Accepted alive Link to Nucleotide Sequence:NM_017869.4Link to Protein Sequence:NP_060339.2Re-query CCDS DB by Nucleotide ID:NM_017869Re-query CCDS DB by Protein ID:NP_060339Link to BLAST:NP_060339.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001371845.1 469 Q8N9N5-2 469 100% 0 0
NP_060339.2 469 Q8N9N5-2 469 100% 0 0

Chromosomal Locations for CCDS 42215.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 87975116 87975185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 87981036 87981127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 87984060 87984259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88006090 88006265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88018428 88018667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88027483 88027650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88033109 88033245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88035323 88035394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88037973 88038011 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88072069 88072212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88076590 88076661 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1410 nt):
ATGATGTCGGAACACGACCTGGCCGATGTGGTTCAGATTGCAGTGGAAGACCTGAGCCCTGACCACCCAG
TTGTTTTGGAGAATCATGTAGTGACAGATGAAGACGAACCTGCTTTGAAACGCCAGCGACTAGAAATCAA
TTGCCAGGATCCATCTATAAAGTCATTCCTGTATTCCATCAACCAGACAATCTGCTTGCGGTTGGATAGC
ATTGAAGCCAAATTGCAAGCCCTGGAGGCTACTTGTAAATCCTTAGAAGAAAAGCTGGATCTGGTCACGA
ACAAGCAGCACAGCCCCATCCAGGTCCCCATGGTGGCCGGCTCCCCTCTCGGGGCAACCCAGACGTGCAA
CAAAGTGCGATGCGCTGTGCCTGGGCGTCGGCAGAACACCATTGTGGTGAAGGTGCCGGGCCAAGAAGAC
AGCCACCACGAGGACGGGGAGAGCGGCTCGGAGGCCAGCGACTCTGTGTCCAGCTGTGGGCAGGCGGGCA
GTCAGAGCATCGGGAGCAACGTCACGCTCATCACCCTGAACTCGGAAGAGGACTACCCCAATGGCACCTG
GCTGGGCGACGAGAACAACCCCGAGATGCGGGTACGCTGCGCCATCATCCCCTCCGACATGCTGCACATC
AGCACCAACTGCCGCACGGCCGAGAAGATGGCGCTCACGCTGCTGGACTACCTCTTCCACCGCGAGGTGC
AGGCTGTGTCCAACCTCTCGGGGCAGGGCAAGCACGGGAAGAAGCAGCTGGACCCGCTCACCATCTACGG
CATCCGGTGTCACCTTTTCTATAAATTTGGCATCACAGAATCCGACTGGTACCGAATCAAGCAGAGCATC
GACTCCAAGTGCCGCACGGCGTGGCGGCGCAAGCAGCGGGGCCAGAGCCTGGCGGTCAAGAGCTTCTCGC
GGAGAACGCCCAACTCGTCCTCCTACTGCCCTTCAGAGCCGATGATGAGCACCCCACCTCCTGCCAGCGA
GCTCCCGCAGCCACAGCCGCAGCCGCAGGCCCTGCACTACGCGCTGGCCAACGCACAGCAGGTGCAGATC
CACCAGATCGGAGAAGACGGACAGGTGCAAGTAATCCCACAGGGACACCTCCACATCGCCCAGGTGCCGC
AGGGGGAGCAAGTCCAGATCACGCAGGACAGCGAGGGCAACCTCCAGATCCATCACGTGGGGCAGGACGG
TCAGGTGCTGCAGGGTGCACAGCTGATCGCCGTGGCCTCCTCGGACCCCGCGGCGGCGGGCGTGGATGGG
TCGCCACTCCAGGGCAGCGACATCCAGGTTCAGTACGTGCAGCTGGCGCCAGTGAGTGACCACACGGCCG
GGGCACAGACGGCCGAAGCCCTGCAGCCCACGCTACAGCCGGAGATGCAGCTCGAGCACGGGGCCATCCA
GATTCAGTGA

Translation (469 aa):
MMSEHDLADVVQIAVEDLSPDHPVVLENHVVTDEDEPALKRQRLEINCQDPSIKSFLYSINQTICLRLDS
IEAKLQALEATCKSLEEKLDLVTNKQHSPIQVPMVAGSPLGATQTCNKVRCAVPGRRQNTIVVKVPGQED
SHHEDGESGSEASDSVSSCGQAGSQSIGSNVTLITLNSEEDYPNGTWLGDENNPEMRVRCAIIPSDMLHI
STNCRTAEKMALTLLDYLFHREVQAVSNLSGQGKHGKKQLDPLTIYGIRCHLFYKFGITESDWYRIKQSI
DSKCRTAWRRKQRGQSLAVKSFSRRTPNSSSYCPSEPMMSTPPPASELPQPQPQPQALHYALANAQQVQI
HQIGEDGQVQVIPQGHLHIAQVPQGEQVQITQDSEGNLQIHHVGQDGQVLQGAQLIAVASSDPAAAGVDG
SPLQGSDIQVQYVQLAPVSDHTAGAQTAEALQPTLQPEMQLEHGAIQIQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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