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Report for CCDS42516.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42516.1 Public Homo sapiens 19 WIZ 24 110 108 CCDS HistoryNCBI Gene:58525Re-query CCDS DB by CCDS ID:42516.1Re-query CCDS DB by GeneID:58525See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42516.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000263381.12 ENSP00000263381.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000263381.12Link to Ensembl Protein Viewer:ENSP00000263381.5Re-query CCDS DB by Nucleotide ID:ENST00000263381Re-query CCDS DB by Protein ID:ENSP00000263381
Original member Current member NCBI NM_021241.3 NP_067064.2 Accepted alive Link to Nucleotide Sequence:NM_021241.3Link to Protein Sequence:NP_067064.2Re-query CCDS DB by Nucleotide ID:NM_021241Re-query CCDS DB by Protein ID:NP_067064Link to BLAST:NP_067064.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_067064.2 794 O95785-2 794 100% 0 0

Chromosomal Locations for CCDS 42516.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 15423076 15423235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15424183 15424378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15424613 15425032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15425241 15425768 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15426982 15427533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15436806 15437129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15448103 15448307 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2385 nt):
ATGGAGGGGTCTCTGGCAGGCAGCCTGGCTGCACCAGATCGTCCCCAAGGCCCAGAGAGACTGCCTGGCC
CGGCGCCAAGGGAGAACATCGAGGGTGGGGCCGAAGCTGCTGAGGGGGAAGGTGGCATCTTCCGGTCCAC
CCGTTACCTGCCTGTCACCAAGGAGGGCCCCCGAGACATTCTGGATGGCAGAGGTGGCATCTCTGTGGCC
AACTTTGACCCAGGCACCTTCAGCCTGATGCGCTGTGACTTCTGCGGGGCTGGCTTCGACACACGGGCCG
GCCTCTCCAGCCACGCCCGGGCCCACCTACGTGACTTCGGTATCACCAACTGGGAGCTCACTGTCTCACC
CATCAACATCCTGCAGGAGCTGCTGGCCACCTCTGCTGCTGAGCAGCCCCCCAGCCCCCTGGGCCGAGAG
CCTGGGGGTCCGCCTGGCAGCTTCCTGACCTCCCGTCGGCCCCGCTTACCTCTCACGGTGCCCTTTCCAC
CCACCTGGGCTGAGGACCCTGGGCCAGCCTATGGAGATGCCTCAGGCCCAGAGCCAGCACGAGACATCCG
CTGCGAGTTCTGTGGTGAGTTCTTCGAGAACCGCAAGGGCCTCTCGAGCCACGCGCGCTCCCATCTGCGG
CAAATGGGCGTGACCGAGTGGTACGTCAATGGCTCGCCCATCGACACGCTGCGGGAGATCCTGAAGAGAC
GGACCCAGTCTCGGCCTGGTGGACCTCCCAACCCACCAGGGCCAAGCCCAAAAGCCCTGGCCAAGATGAT
GGGCGGCGCAGGTCCTGGCAGCTCACTGGAAGCCCGCAGCCCCTCGGACCTTCACATCTCACCCTTGGCC
AAGAAGTTGCCACCACCACCGGGCAGCCCCCTGGGCCACTCACCAACTGCCTCTCCTCCTCCTACGGCCC
GAAAGATGTTCCCAGGCCTGGCTGCACCCTCCTTGCCCAAGAAGCTGAAGCCTGAACAAATACGGGTGGA
GATCAAGCGGGAGATGCTGCCGGGGGCCCTTCATGGGGAACTGCACCCATCTGAGGGTCCCTGGGGGGCA
CCACGGGAAGACATGACACCCCTGAACCTGTCGTCCCGGGCAGAGCCGGTGCGCGACATCCGCTGTGAGT
TCTGCGGCGAGTTCTTCGAGAACCGCAAGGGCCTGTCGAGTCACGCGCGCTCACACCTGCGGCAGATGGG
TGTGACCGAGTGGTCCGTCAATGGTTCGCCCATCGACACACTGCGAGAGATCCTCAAGAAGAAGTCCAAG
CCGTGCCTCATCAAGAAGGAGCCACCGGCTGGAGACCTGGCCCCTGCCCTGGCTGAGGACGGGCCTCCCA
CCGTGGCCCCTGGGCCCGTGCAGTCCCCACTGCCGCTGTCGCCCCTGGCTGGCCGGCCAGGCAAACCAGG
TGCAGGGCCGGCCCAGGTTCCTCGTGAGCTCAGCCTGACGCCCATCACTGGGGCCAAGCCCTCAGCCACT
GGCTACCTGGGCTCAGTGGCAGCCAAGCGGCCCCTGCAGGAGGACCGCCTCCTCCCAGCAGAGGTCAAGG
CCAAGACCTACATCCAGACTGAACTGCCCTTCAAGGCAAAGACCCTTCATGAGAAGACCTCCCACTCCTC
CACCGAGGCCTGCTGCGAGCTGTGTGGCCTTTACTTTGAAAACCGCAAGGCCCTGGCCAGCCACGCACGG
GCACACCTGCGGCAGTTCGGCGTGACCGAGTGGTGCGTCAATGGCTCGCCCATCGAGACACTGAGCGAGT
GGATCAAACACCGGCCCCAGAAGGTGGGCGCCTACCGCAGCTACATCCAGGGCGGCCGCCCCTTCACCAA
GAAGTTCCGCAGTGCCGGCCATGGCCGTGACAGTGACAAGCGGCCGTCCCTGGGGCTGGCACCCGGGGGC
CTGGCCGTGGTCGGCCGCAGTGCCGGAGGGGAGCCAGGGCCCGAGGCTGGCCGGGCAGCCGACGGTGGTG
AGCGGCCTCTGGCAGCCAGCCCGCCAGGCACCGTGAAGGCTGAGGAGCACCAGCGGCAGAACATCAACAA
ATTTGAACGCCGACAAGCCCGCCCTCCAGATGCCTCCGCAGCCCGGGGAGGCGAGGACACCAATGACCTA
CAGCAGAAGCTGGAGGAGGTGCGGCAACCCCCACCCCGAGTCCGGCCAGTCCCCTCCCTGGTGCCCCGGC
CCCCCCAGACATCACTTGTCAAGTTCGTGGGCAACATCTACACCCTCAAATGCAGGTTCTGTGAGGTGGA
ATTCCAGGGCCCCCTCTCCATCCAGGAAGAGTGGGTGCGGCACTTACAGCGGCACATCCTGGAGATGAAC
TTCTCCAAAGCGGACCCCCCACCTGAGGAGTCCCAGGCCCCGCAGGCACAGACAGCGGCGGCAGAGGCTC
CCTAA

Translation (794 aa):
MEGSLAGSLAAPDRPQGPERLPGPAPRENIEGGAEAAEGEGGIFRSTRYLPVTKEGPRDILDGRGGISVA
NFDPGTFSLMRCDFCGAGFDTRAGLSSHARAHLRDFGITNWELTVSPINILQELLATSAAEQPPSPLGRE
PGGPPGSFLTSRRPRLPLTVPFPPTWAEDPGPAYGDASGPEPARDIRCEFCGEFFENRKGLSSHARSHLR
QMGVTEWYVNGSPIDTLREILKRRTQSRPGGPPNPPGPSPKALAKMMGGAGPGSSLEARSPSDLHISPLA
KKLPPPPGSPLGHSPTASPPPTARKMFPGLAAPSLPKKLKPEQIRVEIKREMLPGALHGELHPSEGPWGA
PREDMTPLNLSSRAEPVRDIRCEFCGEFFENRKGLSSHARSHLRQMGVTEWSVNGSPIDTLREILKKKSK
PCLIKKEPPAGDLAPALAEDGPPTVAPGPVQSPLPLSPLAGRPGKPGAGPAQVPRELSLTPITGAKPSAT
GYLGSVAAKRPLQEDRLLPAEVKAKTYIQTELPFKAKTLHEKTSHSSTEACCELCGLYFENRKALASHAR
AHLRQFGVTEWCVNGSPIETLSEWIKHRPQKVGAYRSYIQGGRPFTKKFRSAGHGRDSDKRPSLGLAPGG
LAVVGRSAGGEPGPEAGRAADGGERPLAASPPGTVKAEEHQRQNINKFERRQARPPDASAARGGEDTNDL
QQKLEEVRQPPPRVRPVPSLVPRPPQTSLVKFVGNIYTLKCRFCEVEFQGPLSIQEEWVRHLQRHILEMN
FSKADPPPEESQAPQAQTAAAEAP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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