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Report for CCDS42651.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42651.1 Public Homo sapiens 2 IAH1 24 110 108 CCDS HistoryNCBI Gene:285148Re-query CCDS DB by CCDS ID:42651.1Re-query CCDS DB by GeneID:285148See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42651.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000497473.6 ENSP00000417580.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000497473.6Link to Ensembl Protein Viewer:ENSP00000417580.1Re-query CCDS DB by Nucleotide ID:ENST00000497473Re-query CCDS DB by Protein ID:ENSP00000417580
Original member Current member NCBI NM_001039613.3 NP_001034702.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001039613.3Link to Protein Sequence:NP_001034702.1Re-query CCDS DB by Nucleotide ID:NM_001039613Re-query CCDS DB by Protein ID:NP_001034702Link to BLAST:NP_001034702.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001034702.1 248 Q2TAA2-1 248 100% 0 0

Chromosomal Locations for CCDS 42651.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 9474567 9474647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 9475987 9476039 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 9478222 9478370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 9481286 9481447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 9484432 9484550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 9488147 9488329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (747 nt):
ATGGCGCTGTGCGAGGCCGCGGGCTGCGGGAGTGCCCTGCTCTGGCCTCGCTTGTTGCTCTTCGGGGACT
CCATCACCCAGTTTTCCTTCCAGCAGGGTGGATGGGGAGCATCGCTGGCTGACAGGCTGGTCAGAAAATG
TGATGTTCTGAATCGTGGATTTTCAGGTTACAATACCAGGTGGGCCAAAATTATCCTTCCAAGATTAATC
AGGAAAGGAAACAGTTTGGACATCCCAGTAGCAGTTACAATTTTCTTTGGGGCCAATGACAGTGCACTAA
AAGATGAGAATCCCAAGCAGCACATTCCCCTGGAGGAGTACGCTGCGAACCTAAAGAGCATGGTGCAGTA
CCTGAAGTCCGTGGACATCCCTGAGAATCGAGTCATTCTCATCACGCCGACCCCACTTTGTGAAACAGCC
TGGGAAGAACAGTGCATCATACAAGGTTGCAAACTAAATCGCCTGAACTCTGTTGTTGGTGAATATGCCA
ATGCGTGTTTACAAGTGGCCCAAGACTGTGGGACTGACGTACTTGACCTGTGGACCCTGATGCAGGACAG
CCAGGACTTCTCATCTTATTTATCAGATGGACTACATTTGTCTCCAAAGGGGAATGAATTTTTGTTCTCG
CATCTCTGGCCTTTGATAGAGAAAAAGGTCTCTTCTCTACCTTTGCTGCTTCCTTACTGGCGGGATGTAG
CAGAAGCAAAACCTGAATTAAGTCTGCTGGGAGATGGAGACCATTAG

Translation (248 aa):
MALCEAAGCGSALLWPRLLLFGDSITQFSFQQGGWGASLADRLVRKCDVLNRGFSGYNTRWAKIILPRLI
RKGNSLDIPVAVTIFFGANDSALKDENPKQHIPLEEYAANLKSMVQYLKSVDIPENRVILITPTPLCETA
WEEQCIIQGCKLNRLNSVVGEYANACLQVAQDCGTDVLDLWTLMQDSQDFSSYLSDGLHLSPKGNEFLFS
HLWPLIEKKVSSLPLLLPYWRDVAEAKPELSLLGDGDH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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