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Report for CCDS42954.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42954.1 Public Homo sapiens 21 KRTAP10-1 24 110 108 CCDS HistoryNCBI Gene:386677Re-query CCDS DB by CCDS ID:42954.1Re-query CCDS DB by GeneID:386677See the combined annotation on chromosome 21 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42954.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000400375.1 ENSP00000383226.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000400375.1Link to Ensembl Protein Viewer:ENSP00000383226.1Re-query CCDS DB by Nucleotide ID:ENST00000400375Re-query CCDS DB by Protein ID:ENSP00000383226
Original member Current member NCBI NM_198691.3 NP_941964.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_198691.3Link to Protein Sequence:NP_941964.2Re-query CCDS DB by Nucleotide ID:NM_198691Re-query CCDS DB by Protein ID:NP_941964Link to BLAST:NP_941964.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_941964.2 282 P60331 282 100% 0 0

Chromosomal Locations for CCDS 42954.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 21 (NC_000021.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21See the combined annotation on chromosome 21 in Sequence Viewer

Chromosome Start Stop Links
21 44539302 44540150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (849 nt):
ATGGCCGCGTCCACCATGTCCGTCTGCTCCAGCGCTTGCTCCGACTCCTGGCAGGTGGATGCCTGCCCAG
AGAGCTGCTGTGAGCCCCACTGCTGCGCCCTCAGCTGCTGCGCCCCGGCCCCCTGCCTGACCCTGGTCTG
CACCCCAGTGAGCCGTGTGTCCAGCCCCTGCTGCCAGGCAGCCTGTGAGCCCAGCCCCTGCCAATCAGGC
TGCACCAGCTCCTGCACGCCCTCGTGCTGCCAGCAGTCTAGCTGCCAGCCGGCTTGCTGCACCTCCTCCC
CCTGCCAGCAGGCCTGCTGCGTGCCCGTCTGCTGCAAGCCTGTGTGCTGCCTGCCCACCTGCTCTAAGGA
TTCCTCTTCATGCTGCCAGCAGTCTAGCTGCCAGCCAACTTGCTGTGCCTCTTCCTCCAGCCAGCAGTCC
TGCTGTGTGCCTGTTTGCTGCAAGCCTGTGTGCTATGTGCCCACCTGCTCTGAGGATTCCTCTTCATGCT
GCCAGCAGTCTAGCTGCCATCCAGCTTGCTGCACCTCCTCCCCCTGCCAGCAGGCCTGCTGCGTGCCCGT
CCGTTGCAAGCCTGTCTGCTGCAAGCCCATCTGCTGTGTGCCCGTCTGCTCTGGGGCTTCCACTTCATGC
TGCCAGCAGTCTAGCTGCCAGCCGGCTTGCTGCACCACCTCCTGCTGCAGACCCTCCTCCTCCGTGTCCC
TCCTCTGCCGCCCTGTATGCCGGCCCGCCTGCTGTATGCCTGTCTCCTCCTGCTGTGCCCCTGCCTCCTC
CTGCCAGGCCAGCTGCTGCCGCCCGGCCTCCTGCGTGTCCCTCCTCTGCCGCCCCGCGTGCTCCCGCCCG
GCCTGCTGA

Translation (282 aa):
MAASTMSVCSSACSDSWQVDACPESCCEPHCCALSCCAPAPCLTLVCTPVSRVSSPCCQAACEPSPCQSG
CTSSCTPSCCQQSSCQPACCTSSPCQQACCVPVCCKPVCCLPTCSKDSSSCCQQSSCQPTCCASSSSQQS
CCVPVCCKPVCYVPTCSEDSSSCCQQSSCHPACCTSSPCQQACCVPVRCKPVCCKPICCVPVCSGASTSC
CQQSSCQPACCTTSCCRPSSSVSLLCRPVCRPACCMPVSSCCAPASSCQASCCRPASCVSLLCRPACSRP
AC


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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