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Report for CCDS43509.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43509.1 Public Homo sapiens 6 ABRACL 24 110 108 CCDS HistoryNCBI Gene:58527Re-query CCDS DB by CCDS ID:43509.1Re-query CCDS DB by GeneID:58527See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43509.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000367660.4 ENSP00000356632.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000367660.4Link to Ensembl Protein Viewer:ENSP00000356632.3Re-query CCDS DB by Nucleotide ID:ENST00000367660Re-query CCDS DB by Protein ID:ENSP00000356632
Original member Current member NCBI NM_021243.3 NP_067066.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_021243.3Link to Protein Sequence:NP_067066.1Re-query CCDS DB by Nucleotide ID:NM_021243Re-query CCDS DB by Protein ID:NP_067066Link to BLAST:NP_067066.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_067066.1 81 Q9P1F3 81 100% 0 0

Chromosomal Locations for CCDS 43509.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 139034161 139034221 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 139042719 139042903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (246 nt):
ATGAATGTGGATCACGAGGTTAACCTCTTAGTGGAGGAAATTCATCGTTTGGGTTCAAAAAATGCTGATG
GAAAGTTAAGCGTGAAATTTGGGGTCCTCTTCCGTGATGATAAATGTGCCAACCTCTTTGAAGCATTGGT
AGGAACTCTTAAAGCTGCAAAACGAAGGAAGATTGTAACATATCCAGGAGAGCTGCTTCTGCAAGGTGTT
CATGATGATGTTGACATTATATTACTGCAAGATTAA

Translation (81 aa):
MNVDHEVNLLVEEIHRLGSKNADGKLSVKFGVLFRDDKCANLFEALVGTLKAAKRRKIVTYPGELLLQGV
HDDVDIILLQD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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