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Report for CCDS4360.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4360.1 Public Homo sapiens 5 CCNG1 24 110 108 CCDS HistoryNCBI Gene:900Re-query CCDS DB by CCDS ID:4360.1Re-query CCDS DB by GeneID:900See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4360.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000340828.7 ENSP00000344635.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000340828.7Link to Ensembl Protein Viewer:ENSP00000344635.2Re-query CCDS DB by Nucleotide ID:ENST00000340828Re-query CCDS DB by Protein ID:ENSP00000344635
Original member Current member EBI ENST00000393929.5 ENSP00000377506.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000393929.5Link to Ensembl Protein Viewer:ENSP00000377506.1Re-query CCDS DB by Nucleotide ID:ENST00000393929Re-query CCDS DB by Protein ID:ENSP00000377506
Original member Current member NCBI NM_001364015.1 NP_001350944.1 Accepted alive Link to Nucleotide Sequence:NM_001364015.1Link to Protein Sequence:NP_001350944.1Re-query CCDS DB by Nucleotide ID:NM_001364015Re-query CCDS DB by Protein ID:NP_001350944Link to BLAST:NP_001350944.1
Original member Current member NCBI NM_004060.4 NP_004051.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004060.4Link to Protein Sequence:NP_004051.1Re-query CCDS DB by Nucleotide ID:NM_004060Re-query CCDS DB by Protein ID:NP_004051Link to BLAST:NP_004051.1
Original member Current member NCBI NM_199246.2 NP_954854.1 Accepted alive Link to Nucleotide Sequence:NM_199246.2Link to Protein Sequence:NP_954854.1Re-query CCDS DB by Nucleotide ID:NM_199246Re-query CCDS DB by Protein ID:NP_954854Link to BLAST:NP_954854.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001350944.1 295 P51959-1 295 100% 0 0
NP_004051.1 295 P51959-1 295 100% 0 0
NP_954854.1 295 P51959-1 295 100% 0 0

Chromosomal Locations for CCDS 4360.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 163439257 163439520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 163441078 163441331 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 163441886 163441964 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 163442045 163442143 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 163442374 163442565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (888 nt):
ATGATAGAGGTACTGACAACAACTGACTCTCAGAAACTGCTACACCAGCTGAATGCCCTGTTGGAACAGG
AGTCTAGATGTCAGCCAAAGGTCTGTGGTTTGAGACTAATTGAGTCTGCACACGATAATGGCCTCAGAAT
GACTGCAAGACTAAGGGACTTTGAAGTAAAAGATCTTCTTAGTCTAACTCAGTTCTTTGGCTTTGACACA
GAGACATTTTCTCTAGCTGTGAATTTACTGGACAGATTCCTGTCTAAAATGAAGGTACAGCCCAAGCACC
TTGGGTGTGTTGGACTGAGCTGCTTTTATTTGGCTGTAAAATCAATAGAAGAGGAAAGGAATGTCCCATT
GGCAACTGACTTGATCCGAATAAGTCAATATAGGTTTACGGTTTCAGACTTGATGAGAATGGAAAAGATT
GTATTGGAGAAGGTGTGTTGGAAAGTCAAAGCTACTACTGCCTTTCAATTTCTGCAACTGTATTATTCAC
TCCTTCAAGAGAACTTGCCACTTGAAAGGAGAAATAGCATTAATTTTGAAAGACTAGAAGCTCAACTGAA
GGCATGTCATTGCAGGATCATATTTTCTAAAGCAAAGCCTTCTGTGTTGGCATTGTCTATCATTGCATTA
GAGATCCAAGCACAGAAGTGTGTAGAGTTAACAGAAGGAATAGAATGTCTTCAGAAACATTCCAAGATAA
ATGGCAGAGATCTGACCTTCTGGCAAGAGCTTGTATCCAAATGTTTAACTGAATATTCATCAAATAAGTG
TTCCAAACCAAATGTTCAGAAGTTGAAATGGATTGTTTCTGGGCGTACTGCACGGCAATTGAAGCATAGC
TACTACAGAATAACTCACCTTCCAACAATTCCTGAAATGGTCCCTTAA

Translation (295 aa):
MIEVLTTTDSQKLLHQLNALLEQESRCQPKVCGLRLIESAHDNGLRMTARLRDFEVKDLLSLTQFFGFDT
ETFSLAVNLLDRFLSKMKVQPKHLGCVGLSCFYLAVKSIEEERNVPLATDLIRISQYRFTVSDLMRMEKI
VLEKVCWKVKATTAFQFLQLYYSLLQENLPLERRNSINFERLEAQLKACHCRIIFSKAKPSVLALSIIAL
EIQAQKCVELTEGIECLQKHSKINGRDLTFWQELVSKCLTEYSSNKCSKPNVQKLKWIVSGRTARQLKHS
YYRITHLPTIPEMVP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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