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Report for CCDS43684.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43684.1 Public Homo sapiens 7 CNPY1 24 110 108 CCDS HistoryNCBI Gene:285888Re-query CCDS DB by CCDS ID:43684.1Re-query CCDS DB by GeneID:285888See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 43684.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000321736.5 ENSP00000317439.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000321736.5Link to Ensembl Protein Viewer:ENSP00000317439.5Re-query CCDS DB by Nucleotide ID:ENST00000321736Re-query CCDS DB by Protein ID:ENSP00000317439
Original member Current member EBI ENST00000406197.5 ENSP00000384514.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000406197.5Link to Ensembl Protein Viewer:ENSP00000384514.1Re-query CCDS DB by Nucleotide ID:ENST00000406197Re-query CCDS DB by Protein ID:ENSP00000384514
Original member Current member NCBI NM_001103176.2 NP_001096646.1 Accepted alive Link to Nucleotide Sequence:NM_001103176.2Link to Protein Sequence:NP_001096646.1Re-query CCDS DB by Nucleotide ID:NM_001103176Re-query CCDS DB by Protein ID:NP_001096646Link to BLAST:NP_001096646.1
Original member Current member NCBI NM_001369814.1 NP_001356743.1 Accepted alive Link to Nucleotide Sequence:NM_001369814.1Link to Protein Sequence:NP_001356743.1Re-query CCDS DB by Nucleotide ID:NM_001369814Re-query CCDS DB by Protein ID:NP_001356743Link to BLAST:NP_001356743.1
Original member Current member NCBI NM_001369815.1 NP_001356744.1 Accepted alive Link to Nucleotide Sequence:NM_001369815.1Link to Protein Sequence:NP_001356744.1Re-query CCDS DB by Nucleotide ID:NM_001369815Re-query CCDS DB by Protein ID:NP_001356744Link to BLAST:NP_001356744.1
Original member Current member NCBI NM_001369816.1 NP_001356745.1 Accepted alive Link to Nucleotide Sequence:NM_001369816.1Link to Protein Sequence:NP_001356745.1Re-query CCDS DB by Nucleotide ID:NM_001369816Re-query CCDS DB by Protein ID:NP_001356745Link to BLAST:NP_001356745.1
Original member Current member NCBI NM_001369818.2 NP_001356747.2 Accepted alive Link to Nucleotide Sequence:NM_001369818.2Link to Protein Sequence:NP_001356747.2Re-query CCDS DB by Nucleotide ID:NM_001369818Re-query CCDS DB by Protein ID:NP_001356747Link to BLAST:NP_001356747.2
Original member Current member NCBI NM_001369820.1 NP_001356749.1 Accepted alive Link to Nucleotide Sequence:NM_001369820.1Link to Protein Sequence:NP_001356749.1Re-query CCDS DB by Nucleotide ID:NM_001369820Re-query CCDS DB by Protein ID:NP_001356749Link to BLAST:NP_001356749.1
Original member Current member NCBI NM_001369821.1 NP_001356750.1 Accepted alive Link to Nucleotide Sequence:NM_001369821.1Link to Protein Sequence:NP_001356750.1Re-query CCDS DB by Nucleotide ID:NM_001369821Re-query CCDS DB by Protein ID:NP_001356750Link to BLAST:NP_001356750.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001096646.1 92 Q3B7I2 92 100% 0 0
NP_001356743.1 92 Q3B7I2 92 100% 0 0
NP_001356744.1 92 Q3B7I2 92 100% 0 0
NP_001356745.1 92 Q3B7I2 92 100% 0 0
NP_001356747.2 92 Q3B7I2 92 100% 0 0
NP_001356749.1 92 Q3B7I2 92 100% 0 0
NP_001356750.1 92 Q3B7I2 92 100% 0 0

Chromosomal Locations for CCDS 43684.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 155503068 155503105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 155507020 155507116 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 155508894 155509037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (279 nt):
ATGAACGACTACAAGCTTGAGGAAGACCCTGTGACGAAGGAGAGAACTTTCAAGAGATTCGCTCCTAGGA
AAGGAGACAAAATATACCAAGAATTTAAAAAATTGTATTTTTATTCTGATGCTTACAGACCTTTGAAATT
TGCGTGTGAAACTATAATAGAAGAGTATGAAGATGAAATATCCTCACTTATCGCCCAGGAGACACACTAT
CTAGCTGACAAGCTGTGCAGTGAAAAATCAGATCTGTGTGAAACTTCTGCTAATCATACTGAGCTCTAG

Translation (92 aa):
MNDYKLEEDPVTKERTFKRFAPRKGDKIYQEFKKLYFYSDAYRPLKFACETIIEEYEDEISSLIAQETHY
LADKLCSEKSDLCETSANHTEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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