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Report for CCDS43764.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43764.1 Public Homo sapiens 8 SYBU 24 110 108 CCDS HistoryNCBI Gene:55638Re-query CCDS DB by CCDS ID:43764.1Re-query CCDS DB by GeneID:55638See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43764.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000399066.7 ENSP00000382019.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000399066.7Link to Ensembl Protein Viewer:ENSP00000382019.3Re-query CCDS DB by Nucleotide ID:ENST00000399066Re-query CCDS DB by Protein ID:ENSP00000382019
Original member Current member NCBI NM_001099756.1 NP_001093226.1 Accepted alive Link to Nucleotide Sequence:NM_001099756.1Link to Protein Sequence:NP_001093226.1Re-query CCDS DB by Nucleotide ID:NM_001099756Re-query CCDS DB by Protein ID:NP_001093226Link to BLAST:NP_001093226.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001093226.1 660 Q9NX95-4 660 100% 0 0

Chromosomal Locations for CCDS 43764.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 109574906 109576013 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 109577868 109578017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 109579799 109580002 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 109586060 109586162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 109618842 109619039 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 109642728 109642947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1983 nt):
ATGTCCAATTTTGAGAAGGAGCACAGAGTGCAGCATCATGACAAGGAGATTTCTCGAAGCCGAATTCCCC
GGTTGATTCTTCGGCCCCATATGCCCCAACAACAGCACAAAGTGTCCCCAGCCTCTGAGTCTCCTTTCTC
TGAGGAAGAGAGCAGAGAGTTCAACCCCAGCAGCTCTGGGCGCTCAGCGAGGACCGTTAGCAGCAACAGC
TTCTGCTCAGATGACACAGGCTGTCCTAGCAGCCAGTCAGTGTCTCCTGTGAAGACACCCTCAGATGCTG
GAAACAGCCCCATTGGCTTTTGCCCTGGAAGTGATGAAGGCTTCACCAGAAAGAAATGCACGATTGGAAT
GGTTGGTGAAGGAAGCATTCAGTCCTCTCGATATAAGAAGGAATCAAAGTCAGGCCTTGTGAAACCAGGT
AGTGAAGCTGATTTTAGCTCCTCGAGCAGCACAGGCAGCATTTCCGCTCCTGAGGTCCATATGTCGACTG
CGGGAAGCAAGCGGTCTTCTTCTTCACGCAATCGAGGTCCTCATGGGCGGAGTAATGGAGCTTCGTCACA
CAAGCCTGGCAGCAGCCCATCATCCCCGCGGGAAAAGGACCTTCTGTCCATGCTGTGCAGGAATCAGCTG
AGCCCTGTCAATATCCATCCCAGTTATGCACCTTCTTCCCCAAGCAGTAGCAACTCAGGCTCCTACAAAG
GAAGCGACTGTAGCCCCATCATGAGGCGTTCTGGAAGGTACATGTCTTGCGGTGAAAATCATGGTGTCAG
ACCCCCAAACCCAGAGCAGTATTTGACTCCACTGCAGCAGAAAGAGGTGACAGTGAGACACCTCAAAACC
AAGCTGAAGGAATCTGAGCGCCGACTCCATGAAAGGGAAAGTGAAATCGTGGAGCTTAAGTCCCAGCTGG
CCCGCATGCGAGAGGACTGGATTGAGGAGGAGTGTCACCGGGTAGAGGCCCAGTTGGCACTCAAAGAAGC
CAGGAAAGAGATTAAACAGCTCAAACAGGTCATCGAAACCATGCGGAGCAGCTTGGCTGATAAAGATAAA
GGCATTCAGAAATATTTTGTGGACATAAACATCCAAAACAAGAAGCTGGAGTCTCTCCTTCAGAGCATGG
AGATGGCACACAGTGGCTCTCTGAGGGACGAACTGTGCCTAGACTTTCCATGTGATTCCCCAGAGAAGAG
CTTAACCCTCAACCCCCCTCTTGACACAATGGCAGATGGGTTATCTCTGGAAGAGCAGGTCACGGGGGAA
GGGGCTGACAGGGAGCTACTGGTAGGAGATAGCATAGCCAACAGCACAGATTTGTTCGATGAGATAGTGA
CAGCCACCACCACAGAATCTGGTGACCTGGAGCTTGTGCATTCCACCCCTGGGGCTAACGTCCTGGAGCT
GCTGCCCATAGTCATGGGTCAGGAGGAGGGCAGTGTGGTGGTGGAGCGAGCCGTTCAGACCGACGTGGTG
CCCTACAGCCCAGCCATCTCAGAGCTCATTCAGAGTGTGCTGCAGAAGCTCCAGGACCCCTGTCCCTCGA
GCTTGGCGTCCCCTGATGAGTCTGAACCAGACTCGATGGAGAGCTTCCCAGAGTCCCTCTCTGCCTTAGT
GGTTGATTTAACTCCAAGAAATCCAAACTCAGCCATCCTTTTGTCTCCCGTGGAGACCCCCTACGCCAAT
GTGGATGCAGAAGTTCATGCAAACCGCCTCATGAGAGAGCTGGATTTTGCAGCCTGCGTGGAAGAGAGGT
TGGATGGTGTCATCCCACTGGCTCGCGGGGGCGTCGTGAGGCAGTACTGGAGCAGCAGCTTCCTGGTGGA
TCTCCTGGCTGTGGCTGCCCCCGTGGTCCCCACGGTTCTGTGGGCATTCAGTACTCAGAGAGGGGGAACG
GATCCTGTGTATAACATCGGGGCCTTGCTCAGGGGCTGTTGCGTGGTTGCCCTGCATTCGCTCCGCCGCA
CCGCCTTCCGTATCAAAACCTAA

Translation (660 aa):
MSNFEKEHRVQHHDKEISRSRIPRLILRPHMPQQQHKVSPASESPFSEEESREFNPSSSGRSARTVSSNS
FCSDDTGCPSSQSVSPVKTPSDAGNSPIGFCPGSDEGFTRKKCTIGMVGEGSIQSSRYKKESKSGLVKPG
SEADFSSSSSTGSISAPEVHMSTAGSKRSSSSRNRGPHGRSNGASSHKPGSSPSSPREKDLLSMLCRNQL
SPVNIHPSYAPSSPSSSNSGSYKGSDCSPIMRRSGRYMSCGENHGVRPPNPEQYLTPLQQKEVTVRHLKT
KLKESERRLHERESEIVELKSQLARMREDWIEEECHRVEAQLALKEARKEIKQLKQVIETMRSSLADKDK
GIQKYFVDINIQNKKLESLLQSMEMAHSGSLRDELCLDFPCDSPEKSLTLNPPLDTMADGLSLEEQVTGE
GADRELLVGDSIANSTDLFDEIVTATTTESGDLELVHSTPGANVLELLPIVMGQEEGSVVVERAVQTDVV
PYSPAISELIQSVLQKLQDPCPSSLASPDESEPDSMESFPESLSALVVDLTPRNPNSAILLSPVETPYAN
VDAEVHANRLMRELDFAACVEERLDGVIPLARGGVVRQYWSSSFLVDLLAVAAPVVPTVLWAFSTQRGGT
DPVYNIGALLRGCCVVALHSLRRTAFRIKT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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