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Report for CCDS44153.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44153.1 Public Homo sapiens 1 CIMAP2 24 110 108 CCDS HistoryNCBI Gene:163747Re-query CCDS DB by CCDS ID:44153.1Re-query CCDS DB by GeneID:163747See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44153.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000371273.4 ENSP00000360320.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000371273.4Link to Ensembl Protein Viewer:ENSP00000360320.3Re-query CCDS DB by Nucleotide ID:ENST00000371273Re-query CCDS DB by Protein ID:ENSP00000360320
Original member Current member NCBI NM_001110533.2 NP_001104003.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001110533.2Link to Protein Sequence:NP_001104003.1Re-query CCDS DB by Nucleotide ID:NM_001110533Re-query CCDS DB by Protein ID:NP_001104003Link to BLAST:NP_001104003.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001104003.1 418 Q3ZCV2-1 418 100% 0 0

Chromosomal Locations for CCDS 44153.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 54806117 54806220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54806996 54807083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54807526 54807690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54807889 54808011 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54811794 54811931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54812046 54812189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54813814 54813975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54814914 54815039 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54816989 54817122 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54841801 54841873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1257 nt):
ATGAGGGAAAGCCAGGATGCCGCCGGAGCTCATGGCTGGAACCGCGTCGGCTCCACGGCCACCAAGTGGT
TCACCGGGGCGCCCTTCGGGGTGCAGAGCCACAGGTTTGACATCTCTGCTGTTTATCCCAACTGGAAGAA
GTTCAGCACCTTCACTGAGGCCCCATACTCCACGCGTTATTCTACCCAAGTGTCCCACATAGGCCCTGGG
ACTTACAGCTCCAAAGAGACCTGCTTCAGCAAGAAGAAGCTGATGAAGGAGGTGGACACAGGCTGGGCCA
AGGCCCAGGAAGCCACGCGGCTGACCCAGCTACCCCACTTCCAGTACCAGGCCATCATGAAAGAGAAGCG
GCTGAAGGAGCAAAAGCTGGGCCCCGGCTCCTACAACCTCAAAGACTTCTTAGAACAGCTGCGGGAGAAA
CCATGTAGCACCCGGGGGCTGCTCAGCTCTGGGGAGGTTCGCTTCCGAGGACTCACTGGGAACTACTATC
CAGGCCCTGGAAATTATGGGGAGAAGGGTAACCCATACACCAAGCTGGAGGAGAATGCCTGGAACCGGTC
TCATTCCGAGGGCCTCATGTGCAGGATGAGCAACAAGCCACACCCCCGGCCTCATCAGGGGAGTGGTCTG
GGACCCGGCACCTACTTCTTCAAAAGCGACCTTGAGACATATGTGGCACGATCCGTCGGCACCCGCGGCC
CCTATGACACTTTCTCTGGTGATCGGAGCAAGCCACTGCCTTATGGGCACTACTCCATGCAGAAAAAAAA
GCCCAGGGAACTGATGAATTTCAAGAGCTTTGTAGAAGAACTTAACTCACATCACAATAAGAAGCATGGG
GTTTTTTCTAAACTTCCCCGAAACCCGAAAACCCCTACAGAGAGGATTTACTGGGCCAACCTCAGCCAGT
GCCCCCGCACACTGGCCACATCTGGCCCCAGTTTCTGGCTTCCACAAGAGAAGAAATGCAAACCCGTCAA
CCAGCCCCCATTCCTGTTGACCTCCAAGGGGTCAGGTGCAAAGGCCTGCCAGATGATTATGGGAAGCTGG
AACCCAGTAGGTGTGGGCCGCTACCTCAACACCTGGCTGATGGAGACAAAGGACAGGCGGCAGCGATATC
GATCCCTATTCCTGAGTGGATCCAAACGCTACCTCTCAGACCTGGCCCGGGACATGCTCATGCAGGAAAG
GATCACACCATTTACTAAGGGAAAGTGCCCTCCAACTGTGGATTACAATTCAGATCCTACTCCTTAA

Translation (418 aa):
MRESQDAAGAHGWNRVGSTATKWFTGAPFGVQSHRFDISAVYPNWKKFSTFTEAPYSTRYSTQVSHIGPG
TYSSKETCFSKKKLMKEVDTGWAKAQEATRLTQLPHFQYQAIMKEKRLKEQKLGPGSYNLKDFLEQLREK
PCSTRGLLSSGEVRFRGLTGNYYPGPGNYGEKGNPYTKLEENAWNRSHSEGLMCRMSNKPHPRPHQGSGL
GPGTYFFKSDLETYVARSVGTRGPYDTFSGDRSKPLPYGHYSMQKKKPRELMNFKSFVEELNSHHNKKHG
VFSKLPRNPKTPTERIYWANLSQCPRTLATSGPSFWLPQEKKCKPVNQPPFLLTSKGSGAKACQMIMGSW
NPVGVGRYLNTWLMETKDRRQRYRSLFLSGSKRYLSDLARDMLMQERITPFTKGKCPPTVDYNSDPTP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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