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Report for CCDS44369.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44369.1 Public Homo sapiens 10 ZNF438 24 110 108 CCDS HistoryNCBI Gene:220929Re-query CCDS DB by CCDS ID:44369.1Re-query CCDS DB by GeneID:220929See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44369.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000331737.10 ENSP00000333571.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000331737.10Link to Ensembl Protein Viewer:ENSP00000333571.6Re-query CCDS DB by Nucleotide ID:ENST00000331737Re-query CCDS DB by Protein ID:ENSP00000333571
Original member Current member EBI ENST00000452305.5 ENSP00000413060.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000452305.5Link to Ensembl Protein Viewer:ENSP00000413060.1Re-query CCDS DB by Nucleotide ID:ENST00000452305Re-query CCDS DB by Protein ID:ENSP00000413060
Original member Current member NCBI NM_001143770.2 NP_001137242.1 Accepted alive Link to Nucleotide Sequence:NM_001143770.2Link to Protein Sequence:NP_001137242.1Re-query CCDS DB by Nucleotide ID:NM_001143770Re-query CCDS DB by Protein ID:NP_001137242Link to BLAST:NP_001137242.1
Original member Current member NCBI NM_001143771.2 NP_001137243.1 Accepted alive Link to Nucleotide Sequence:NM_001143771.2Link to Protein Sequence:NP_001137243.1Re-query CCDS DB by Nucleotide ID:NM_001143771Re-query CCDS DB by Protein ID:NP_001137243Link to BLAST:NP_001137243.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001137242.1 818 Q7Z4V0-2 818 100% 0 0
NP_001137243.1 818 Q7Z4V0-2 818 100% 0 0

Chromosomal Locations for CCDS 44369.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 30844961 30845573 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 30848531 30850367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 30857680 30857686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2457 nt):
ATGGATAGTGAATCAAACATCCCTTCTGGAACAATACAGAGTAGGAAAGGTTTGCAGAATAAGAGTCAGT
TTAGGACCATTGCACCAAAAATTGTGCCCAAAGTCCTAACGTCCAGAATGCTGCCATGTCATTCACCATC
ACGCTCTGATCAGGTGAATCTGGGACCCTCCATCAACTCCAAGCTGCTGGGGATGTCCACCCAGAACTAT
GCCCTGATGCAGGTTGCTGGCCAGGAGGGGACATTTTCTCTTGTTGCTCTGCCACATGTTGCCTCAGCTC
AGCCAATTCAGAAACCCAGAATGTCCCTACCTGAAAACCTGAAACTTCCTATTCCTAGATATCAACCCCC
TAGAAATAGCAAAGCATCAAGAAAGAAACCCATCCTGATCTTTCCTAAGAGTGGCTGTAGCAAAGCTCCT
GCCCAAACCCAAATGTGTCCTCAGATGTCCCCTTCCCCACCTCACCACCCTGAACTCCTGTACAAACCCA
GTCCATTTGAGGAAGTACCATCACTAGAGCAAGCCCCAGCCAGCATTAGCACAGCTGCGCTGACCAATGG
AAGTGACCATGGGGACTTGAGACCACCAGTGACCAACACCCATGGCAGTCTGAACCCTCCTGCTACCCCA
GCATCATCCACACCAGAGGAGCCTGCCAAGCAGGACCTCACAGCTCTTTCAGGGAAAGCACACTTTGTAA
GCAAGATAACATCTAGTAAACCTTCTGCTGTTGCCAGTGAAAAATTTAAAGAACAAGTTGATCTTGCAAA
AACCATGACCAATTTATCACCAACCATTCTTGGCAATGCAGTTCAGTTGATCTCTTCAGTCCCCAAAGGG
AAACTGCCAATCCCACCCTACTCAAGAATGAAGACAATGGAGGTTTACAAAATCAAATCAGATGCTAACA
TTGCAGGTTTTTCTTTACCAGGACCTAAGGCCGACTGTGATAAGATACCCTCCACCACAGAAGGCTTTAA
TGCAGCCACCAAGGTGGCAAGCAGGCTACCTGTTCCACAAGTGTCACAGCAGAGTGCCTGTGAAAGTGCC
TTTTGTCCACCCACCAAACTTGATCTTAACCACAAAACAAAACTGAACAGTGGAGCAGCAAAGAGAAAAG
GAAGAAAACGGAAGGTACCAGATGAAATTTTGGCATTTCAGGGAAAAAGGAGGAAATATATCATTAATAA
GTGTAGAGATGGTAAAGAAAGAGTAAAAAATGATCCCCAAGAATTCAGAGACCAAAAGCTGGGGACCCTG
AAAAAATACCGTAGCATTATGCCCAAACCTATCATGGTCATACCCACTTTGGCCTCCCTGGCTTCTCCAA
CTACACTACAGTCCCAGATGCTTGGGGGCCTAGGACAGGATGTTTTGTTAAATAATTCACTCACTCCTAA
ATATCTTGGCTGTAAGCAAGACAACAGCTCTTCCCCTAAGCCCAGCTCCGTGTTCAGAAATGGATTCTCT
GGCATTAAGAAGCCTTGGCACAGATGTCACGTCTGCAACCACCACTTCCAGTTCAAACAGCACCTTCGAG
ACCACATGAATACACACACCAACAGACGCCCTTACAGTTGTCGGATTTGTCGCAAGTCCTATGTACGTCC
TGGCAGCCTGAGCACACACATGAAACTTCATCATGGTGAGAACCGTCTGAAGAAACTCATGTGTTGTGAG
TTTTGTGCAAAAGTGTTTGGCCACATCCGAGTCTATTTTGGCCATCTGAAAGAAGTGCATAGGGTTGTGA
TCAGCACTGAGCCTGCGCCCAGTGAACTGCAGCCAGGAGACATACCAAAGAACAGAGACATGAGTGTGCG
AGGCATGGAGGGATCATTGGAGAGGGAAAACAAGTCCAACCTGGAAGAAGACTTCCTTCTAAACCAGGCA
GACGAAGTCAAATTACAAATCAAATGTGGTCGTTGTCAGATTACTGCTCAGTCTTTTGCGGAAATAAAAT
TTCATTTACTTGATGTTCATGGAGAGGAAATTGAGGGCAGGCTACAAGAAGGGACCTTCCCAGGAAGCAA
GGGGACTCAGGAAGAGTTGGTGCAGCACGCTAGCCCCGACTGGAAAAGGCATCCTGAGAGAGGGAAGCCG
GAGAAGGTTCATTCCTCCTCCGAGGAATCACATGCATGTCCAAGACTGAAAAGGCAGCTCCACCTTCATC
AGAATGGCGTGGAAATGCTCATGGAAAATGAAGGACCCCAGTCAGGAACCAACAAGCCAAGGGAAACCTG
CCAGGGCCCTGAGTGTCCTGGCCTCCACACGTTTCTCTTGTGGTCCCATTCAGGCTTTAACTGCCTGCTT
TGTGCAGAGATGCTGGGACGGAAAGAGGACCTCCTCCACCACTGGAAGCACCAGCATAACTGTGAGGACC
CTTCCAAACTGTGGGCTATTTTAAATACGGTCTCCAACCAGGGAGTGATCGAACTTTCCAGTGAAGCTGA
GAAATGA

Translation (818 aa):
MDSESNIPSGTIQSRKGLQNKSQFRTIAPKIVPKVLTSRMLPCHSPSRSDQVNLGPSINSKLLGMSTQNY
ALMQVAGQEGTFSLVALPHVASAQPIQKPRMSLPENLKLPIPRYQPPRNSKASRKKPILIFPKSGCSKAP
AQTQMCPQMSPSPPHHPELLYKPSPFEEVPSLEQAPASISTAALTNGSDHGDLRPPVTNTHGSLNPPATP
ASSTPEEPAKQDLTALSGKAHFVSKITSSKPSAVASEKFKEQVDLAKTMTNLSPTILGNAVQLISSVPKG
KLPIPPYSRMKTMEVYKIKSDANIAGFSLPGPKADCDKIPSTTEGFNAATKVASRLPVPQVSQQSACESA
FCPPTKLDLNHKTKLNSGAAKRKGRKRKVPDEILAFQGKRRKYIINKCRDGKERVKNDPQEFRDQKLGTL
KKYRSIMPKPIMVIPTLASLASPTTLQSQMLGGLGQDVLLNNSLTPKYLGCKQDNSSSPKPSSVFRNGFS
GIKKPWHRCHVCNHHFQFKQHLRDHMNTHTNRRPYSCRICRKSYVRPGSLSTHMKLHHGENRLKKLMCCE
FCAKVFGHIRVYFGHLKEVHRVVISTEPAPSELQPGDIPKNRDMSVRGMEGSLERENKSNLEEDFLLNQA
DEVKLQIKCGRCQITAQSFAEIKFHLLDVHGEEIEGRLQEGTFPGSKGTQEELVQHASPDWKRHPERGKP
EKVHSSSEESHACPRLKRQLHLHQNGVEMLMENEGPQSGTNKPRETCQGPECPGLHTFLLWSHSGFNCLL
CAEMLGRKEDLLHHWKHQHNCEDPSKLWAILNTVSNQGVIELSSEAEK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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