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Report for CCDS44414.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44414.1 Public Homo sapiens 10 RUFY2 24 110 108 CCDS HistoryNCBI Gene:55680Re-query CCDS DB by CCDS ID:44414.1Re-query CCDS DB by GeneID:55680See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44414.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000399200.7 ENSP00000382151.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000399200.7Link to Ensembl Protein Viewer:ENSP00000382151.2Re-query CCDS DB by Nucleotide ID:ENST00000399200Re-query CCDS DB by Protein ID:ENSP00000382151
Original member Current member NCBI NM_001042417.2 NP_001035882.1 Accepted alive Link to Nucleotide Sequence:NM_001042417.2Link to Protein Sequence:NP_001035882.1Re-query CCDS DB by Nucleotide ID:NM_001042417Re-query CCDS DB by Protein ID:NP_001035882Link to BLAST:NP_001035882.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001035882.1 403 Q8WXA3-4 403 100% 0 0

Chromosomal Locations for CCDS 44414.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 68378562 68378670 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68379424 68379521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68381232 68381399 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68383798 68383914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68384051 68384152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68386059 68386128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68393138 68393203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68394075 68394136 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68394328 68394451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68401620 68401737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68404671 68404844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68407186 68407189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1212 nt):
ATGGCTACAAAAGACCCCACAGCTGTAGAGAGAGCAAACTTGTTAAACATGGCTAAACTGAGTATCAAAG
GACTCATTGAATCTGCTCTGAGCTTTGGCCGCACTTTGGATTCTGACTATCCCCCCTTGCAGCAATTCTT
TGTTGTTATGGAACATTGCCTGAAACACGGTCTTAAAGTAAGAAAATCATTTTTGAGTTACAACAAAACC
ATCTGGGGCCCTTTGGAACTGGTGGAGAAGCTGTACCCCGAAGCAGAGGAAATAGGAGCTAGTGTCCGGG
ATCTACCTGGTCTGAATGAGTTTTATGAGTATCACGCACTAATGATGGAAGAAGAAGGAGCAGTAATTGT
TGGGCTGCTGGTTGGCCTGAATGTGATCGATGCTAATCTGTGTGTGAAGGGAGAGGATTTAGACTCACAA
GTTGGAGTGATTGATTTTTCTATGTATTTAAAGAATGAAGAAGATATTGGAAATAAAGAAAGGAATGTTC
AAATTGCTGCCATATTAGACCAAAAGAATTATGTTGAAGAATTAAATAGACAACTGAACAGCACAGTCAG
CAGCCTCCATTCAAGAGTTGATTCATTAGAAAAGTCAAATACTAAGCTGATTGAAGAGTTAGCAATAGCA
AAGAATAACATCATTAAACTCCAGGAAGAAAATCATCAATTACGAAGTGAAAATAAATTGATTTTAATGA
AAACACAGCAGCACCTAGAGGTTACCAAAGTAGATGTGGAAACTGAGCTTCAAACATATAAGCATTCTCG
TCAGGGGCTAGATGAAATGTACAATGAAGCCAGAAGGCAGCTTCGAGATGAATCTCAGTTACGACAGGAT
GTAGAGAATGAGCTAGCAGTACAAGTTAGTATGAAGCATGAGATTGAACTTGCCATGAAGTTGCTGGAGA
AAGATATCCATGAGAAACAAGATACTCTGATAGGCCTTCGACAACAACTAGAGGAAGTTAAAGCAATTAA
CATAGAGATGTATCAAAAGTTGCAGGGTTCTGAAGATGGCTTGAAAGAAAAAAATGAAATAATTGCCCGA
CTAGAAGAAAAAACCAATAAAATTACTGCAGCCATGAGGCAGCTGGAACAAAGTGACAACGATTTGTTAA
CTCAAACTAGGACAATTGCAATGTCATTGGTGAAATGTGCCAGCAGTGACACGCAGGACCAGTACAAGCT
GGTTAAAGATATATCTTTCTGA

Translation (403 aa):
MATKDPTAVERANLLNMAKLSIKGLIESALSFGRTLDSDYPPLQQFFVVMEHCLKHGLKVRKSFLSYNKT
IWGPLELVEKLYPEAEEIGASVRDLPGLNEFYEYHALMMEEEGAVIVGLLVGLNVIDANLCVKGEDLDSQ
VGVIDFSMYLKNEEDIGNKERNVQIAAILDQKNYVEELNRQLNSTVSSLHSRVDSLEKSNTKLIEELAIA
KNNIIKLQEENHQLRSENKLILMKTQQHLEVTKVDVETELQTYKHSRQGLDEMYNEARRQLRDESQLRQD
VENELAVQVSMKHEIELAMKLLEKDIHEKQDTLIGLRQQLEEVKAINIEMYQKLQGSEDGLKEKNEIIAR
LEEKTNKITAAMRQLEQSDNDLLTQTRTIAMSLVKCASSDTQDQYKLVKDISF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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