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Report for CCDS44819.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44819.1 Public Homo sapiens 12 GPR162 24 110 108 CCDS HistoryNCBI Gene:27239Re-query CCDS DB by CCDS ID:44819.1Re-query CCDS DB by GeneID:27239See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44819.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000428545.6 ENSP00000399670.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000428545.6Link to Ensembl Protein Viewer:ENSP00000399670.2Re-query CCDS DB by Nucleotide ID:ENST00000428545Re-query CCDS DB by Protein ID:ENSP00000399670
Original member Current member NCBI NM_014449.2 NP_055264.1 Accepted alive Link to Nucleotide Sequence:NM_014449.2Link to Protein Sequence:NP_055264.1Re-query CCDS DB by Nucleotide ID:NM_014449Re-query CCDS DB by Protein ID:NP_055264Link to BLAST:NP_055264.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055264.1 304 Q16538-2 304 100% 0 0

Chromosomal Locations for CCDS 44819.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 6823749 6823763 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 6825484 6825673 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 6826196 6826353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 6826653 6827204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (915 nt):
ATGCTGAGCACTGGGGTGGTGAGCTTCTTCTCCCTCAAGTCGGACTCGGCGCCCCCCTGGATGGTGCTGG
CTGTGCTGTGGTGCTCCATGGCACAGACGCTGCTGCTGCCCTCCTTCATCTGGTCCTGCGAGCGCTACCG
CGCCGACGTGCGCACAGTGTGGGAGCAATGCGTGGCCATCATGTCTGAGGAGGATGGAGATGACGATGGG
GGCTGTGACGACTATGCAGAGGGCCGAGTTTGCAAAGTTCGCTTTGATGCTAACGGAGCCACAGGACCAG
GGAGCCGGGACCCCGCCCAGGTGAAGCTGCTGCCTGGAAGGCACATGCTCTTCCCTCCTCTTGAGAGAGT
CCACTACTTACAGGTCCCCCTATCCCGGCGTCTGTCCCATGATGAGACAAACATCTTCTCTACCCCTCGG
GAACCAGGCTCCTTCCTGCACAAGTGGTCATCCTCTGATGACATCCGGGTCCTCCCAGCCCAGAGCCGGG
CCCTCGGGGGTCCTCCTGAGTACCTGGGACAAAGACACAGGTTGGAGGACGAGGAGGACGAGGAAGAGGC
TGAAGGTGGGGGGCTGGCCAGCCTTCGCCAATTCTTGGAGAGTGGGGTTCTGGGGTCAGGTGGGGGACCC
CCACGGGGTCCTGGCTTCTTCCGGGAGGAGATCACCACCTTCATCGATGAGACACCTCTGCCTTCTCCGA
CTGCCTCACCAGGGCACTCTCCTCGTCGGCCCCGGCCACTGGGCCTCTCACCCCGCCGACTCTCCCTTGG
GTCCCCTGAGAGCAGAGCCGTTGGACTTCCTTTGGGACTAAGCGCAGGGAGACGCTGCTCCCTGACGGGG
GGTGAAGAAAGTGCAAGGGCTTGGGGAGGATCCTGGGGCCCAGGCAACCCCATCTTTCCCCAGCTGACCC
TGTGA

Translation (304 aa):
MLSTGVVSFFSLKSDSAPPWMVLAVLWCSMAQTLLLPSFIWSCERYRADVRTVWEQCVAIMSEEDGDDDG
GCDDYAEGRVCKVRFDANGATGPGSRDPAQVKLLPGRHMLFPPLERVHYLQVPLSRRLSHDETNIFSTPR
EPGSFLHKWSSSDDIRVLPAQSRALGGPPEYLGQRHRLEDEEDEEEAEGGGLASLRQFLESGVLGSGGGP
PRGPGFFREEITTFIDETPLPSPTASPGHSPRRPRPLGLSPRRLSLGSPESRAVGLPLGLSAGRRCSLTG
GEESARAWGGSWGPGNPIFPQLTL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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