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Report for CCDS44838.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44838.1 Public Homo sapiens 12 DERA 24 110 108 CCDS HistoryNCBI Gene:51071Re-query CCDS DB by CCDS ID:44838.1Re-query CCDS DB by GeneID:51071See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44838.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000428559.7 ENSP00000416583.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000428559.7Link to Ensembl Protein Viewer:ENSP00000416583.2Re-query CCDS DB by Nucleotide ID:ENST00000428559Re-query CCDS DB by Protein ID:ENSP00000416583
Original member Current member NCBI NM_015954.4 NP_057038.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015954.4Link to Protein Sequence:NP_057038.2Re-query CCDS DB by Nucleotide ID:NM_015954Re-query CCDS DB by Protein ID:NP_057038Link to BLAST:NP_057038.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057038.2 318 Q9Y315 318 100% 0 0

Chromosomal Locations for CCDS 44838.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 15911384 15911414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 15956936 15957033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 15958188 15958335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 15959829 15959924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 15962813 15962947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 15982308 15982436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 16032542 16032654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 16036232 16036381 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 16036690 16036746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (957 nt):
ATGTCCGCGCACAATCGGGGCACCGAGCTCGACCTTAGCTGGATCTCCAAAATACAAGTGAATCACCCGG
CAGTTCTGAGGCGTGCGGAACAAATCCAGGCTCGCAGAACCGTGAAAAAGGAGTGGCAGGCTGCTTGGCT
CCTGAAAGCTGTTACCTTTATAGATCTTACTACACTTTCAGGTGATGATACATCTTCCAACATTCAAAGG
CTCTGTTATAAAGCCAAATACCCAATCCGGGAAGATCTCTTAAAAGCTTTAAATATGCATGATAAAGGCA
TTACTACAGCCGCCGTTTGTGTTTATCCCGCCCGGGTGTGTGATGCTGTAAAAGCACTCAAGGCTGCAGG
CTGTAATATCCCTGTGGCATCAGTGGCCGCTGGATTTCCAGCTGGACAGACTCATTTGAAGACACGATTA
GAAGAGATCAGATTGGCTGTGGAAGATGGAGCTACAGAAATCGACGTGGTAATTAACAGAAGCTTGGTGC
TGACAGGCCAGTGGGAAGCCCTGTATGATGAGATTCGTCAGTTTCGCAAGGCCTGTGGGGAGGCTCATCT
TAAAACTATATTAGCGACAGGAGAACTTGGAACTCTTACTAATGTCTATAAAGCCAGTATGATAGCAATG
ATGGCAGGATCAGATTTTATTAAGACCTCTACTGGAAAAGAAACAGTAAATGCCACCTTCCCGGTAGCTA
TAGTAATGCTGCGGGCCATTAGAGATTTCTTCTGGAAAACTGGAAACAAGATAGGGTTTAAACCAGCAGG
AGGCATCCGCAGTGCAAAGGATTCCCTTGCTTGGCTCTCTCTTGTAAAGGAGGAGCTTGGAGATGAGTGG
CTGAAGCCAGAACTCTTTCGAATAGGTGCCAGTACTCTGCTCTCGGACATTGAGAGGCAGATTTACCATC
ATGTGACTGGAAGATATGCAGCTTATCATGATCTTCCAATGTCTTAA

Translation (318 aa):
MSAHNRGTELDLSWISKIQVNHPAVLRRAEQIQARRTVKKEWQAAWLLKAVTFIDLTTLSGDDTSSNIQR
LCYKAKYPIREDLLKALNMHDKGITTAAVCVYPARVCDAVKALKAAGCNIPVASVAAGFPAGQTHLKTRL
EEIRLAVEDGATEIDVVINRSLVLTGQWEALYDEIRQFRKACGEAHLKTILATGELGTLTNVYKASMIAM
MAGSDFIKTSTGKETVNATFPVAIVMLRAIRDFFWKTGNKIGFKPAGGIRSAKDSLAWLSLVKEELGDEW
LKPELFRIGASTLLSDIERQIYHHVTGRYAAYHDLPMS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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