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Report for CCDS45585.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45585.1 Public Homo sapiens 17 VMO1 24 110 108 CCDS HistoryNCBI Gene:284013Re-query CCDS DB by CCDS ID:45585.1Re-query CCDS DB by GeneID:284013See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45585.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000354194.4 ENSP00000346133.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000354194.4Link to Ensembl Protein Viewer:ENSP00000346133.4Re-query CCDS DB by Nucleotide ID:ENST00000354194Re-query CCDS DB by Protein ID:ENSP00000346133
Original member Current member NCBI NM_001144941.2 NP_001138413.1 Accepted alive Link to Nucleotide Sequence:NM_001144941.2Link to Protein Sequence:NP_001138413.1Re-query CCDS DB by Nucleotide ID:NM_001144941Re-query CCDS DB by Protein ID:NP_001138413Link to BLAST:NP_001138413.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001138413.1 70 Q7Z5L0-2 70 100% 0 0

Chromosomal Locations for CCDS 45585.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 4785642 4785659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4786158 4786352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (213 nt):
ATGGAGCGGGGCGCAGGAGCCAAGCTGCTGCCGCTGCTGCTGCTTCTGCGGGCGACTGGTTTCACATGTG
CACAGACAGATGGCCGGAACGGCTACACGGCGGTCATCGAAGTGACCAGCGGGGGTCCCTGGGGCGACTG
GGCCTGGCCTGAGATGTGTCCCGATGGATTCTTCGCCAGCGGGTTCTCGCTCAAGCTGGGGCGAATGGAG
TGA

Translation (70 aa):
MERGAGAKLLPLLLLLRATGFTCAQTDGRNGYTAVIEVTSGGPWGDWAWPEMCPDGFFASGFSLKLGRME


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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