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Report for CCDS45643.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45643.1 Public Homo sapiens 17 GOSR1 24 110 108 CCDS HistoryNCBI Gene:9527Re-query CCDS DB by CCDS ID:45643.1Re-query CCDS DB by GeneID:9527See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45643.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000451249.7 ENSP00000414441.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000451249.7Link to Ensembl Protein Viewer:ENSP00000414441.2Re-query CCDS DB by Nucleotide ID:ENST00000451249Re-query CCDS DB by Protein ID:ENSP00000414441
Original member Current member NCBI NM_001007025.2 NP_001007026.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001007025.2Link to Protein Sequence:NP_001007026.1Re-query CCDS DB by Nucleotide ID:NM_001007025Re-query CCDS DB by Protein ID:NP_001007026Link to BLAST:NP_001007026.1

Chromosomal Locations for CCDS 45643.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 30477434 30477464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 30481143 30481257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 30484214 30484301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 30484663 30484770 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 30490126 30490217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 30492679 30492753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 30510880 30510909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 30519939 30520021 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 30522254 30522378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (747 nt):
ATGGCGGCAGGGACCAGCAGTTACTGGGAAGATCTCAGGAAACAGGCTCGACAGCTGGAAAATGAACTTG
ACCTGAAACTAGTTTCCTTCAGCAAACTATGTACAAGTTACAGTCATAGCAGTACCCGAGATGGAAGACG
CGACAGTTCTGATACAACACCCCTTTTAAATGGATCAAGCCAAGACAGAATGTTTGAGACAATGGCGATT
GAGATTGAACAACTTTTGGCAAGGCTTACAGGGGTAAATGATAAAATGGCAGAATATACCAACAGTGCAG
GTGTCCCCTCCTTGAATGCAGCCCTGATGCATACATTACAGCGGCATAGAGACATATTGCAGGATTATAC
ACATGAATTCCATAAAACCAAAGCAAACTTTATGGCAATACGGGAAAGGGAGAATCTTATGGGATCAGTA
CGAAAAGATATTGAGTCATATAAAAGTGGGTCTGGAGTAAACAACAGAAGAACTGAGCTATTTTTGAAAG
AACATGACCACCTTCGAAACTCAGATCGTCTGATAGAAGAGACAATAAGCATTGCTATGGCAACAAAAGA
AAATATGACTTCACAGAGAGGAATGTTGAAGTCAATTCACAGCAAAATGAACACTTTGGCCAATCGTTTT
CCTGCTGTAAACAGCCTGATCCAGAGGATCAACCTGAGGAAGCGGCGGGACTCGCTCATCCTAGGGGGTG
TTATTGGGATCTGTACCATCCTGTTGCTGCTGTATGCGTTCCATTGA

Translation (248 aa):
MAAGTSSYWEDLRKQARQLENELDLKLVSFSKLCTSYSHSSTRDGRRDSSDTTPLLNGSSQDRMFETMAI
EIEQLLARLTGVNDKMAEYTNSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKANFMAIRERENLMGSV
RKDIESYKSGSGVNNRRTELFLKEHDHLRNSDRLIEETISIAMATKENMTSQRGMLKSIHSKMNTLANRF
PAVNSLIQRINLRKRRDSLILGGVIGICTILLLLYAFH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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