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Report for CCDS45897.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45897.1 Public Homo sapiens 19 GAMT 24 110 108 CCDS HistoryNCBI Gene:2593Re-query CCDS DB by CCDS ID:45897.1Re-query CCDS DB by GeneID:2593See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45897.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000447102.8 ENSP00000403536.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000447102.8Link to Ensembl Protein Viewer:ENSP00000403536.2Re-query CCDS DB by Nucleotide ID:ENST00000447102Re-query CCDS DB by Protein ID:ENSP00000403536
Original member Current member NCBI NM_138924.3 NP_620279.1 Accepted alive Link to Nucleotide Sequence:NM_138924.3Link to Protein Sequence:NP_620279.1Re-query CCDS DB by Nucleotide ID:NM_138924Re-query CCDS DB by Protein ID:NP_620279Link to BLAST:NP_620279.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_620279.1 269 Q14353-2 269 100% 0 0

Chromosomal Locations for CCDS 45897.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 1398676 1399026 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1399128 1399195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1399524 1399587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1399793 1399938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1401296 1401476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (810 nt):
ATGAGCGCCCCCAGCGCGACCCCCATCTTCGCGCCCGGCGAGAACTGCAGCCCCGCGTGGGGGGCGGCGC
CCGCGGCCTACGACGCAGCGGACACGCACCTGCGCATCCTGGGCAAGCCGGTGATGGAGCGCTGGGAGAC
CCCCTATATGCACGCGCTGGCCGCCGCCGCCTCCTCCAAAGGGGGCCGGGTCCTGGAGGTGGGCTTTGGC
ATGGCCATCGCAGCGTCAAAGGTGCAGGAGGCGCCCATTGATGAGCATTGGATCATCGAGTGCAATGACG
GCGTCTTCCAGCGGCTCCGGGACTGGGCCCCACGGCAGACACACAAGGTCATCCCCTTGAAAGGCCTGTG
GGAGGATGTGGCACCCACCCTGCCTGACGGTCACTTTGATGGGATCCTGTACGACACGTACCCACTCTCG
GAGGAGACCTGGCACACACACCAGTTCAACTTCATCAAGAACCACGCCTTTCGCCTGCTGAAGCCGGGGG
GCGTCCTCACCTACTGCAACCTCACCTCCTGGGGGGAGCTGATGAAGTCCAAGTACTCAGACATCACCAT
CATGTTTGAGGTGCGCCCACCTGAAGTTCCCCATGGGTCTCCAGGAAGTGACCTTGGATGGGGGTGGGAA
GGGGCTGCTGGAGCCACCTTGCTACCTGGGGAGGGTCCCTTCCTGACCCCCTGGGTGGGCTGGACTGTGC
TGGTTCATTTAGAAATCAAAGTCCTTTGCCTGGCGCAGTGGCTGCCAGGAGCAGTGGCTCAGGTCTATAA
TCCCAGCACTGTGGAAGGCCGAGGTGGGCAGATTGCTTGA

Translation (269 aa):
MSAPSATPIFAPGENCSPAWGAAPAAYDAADTHLRILGKPVMERWETPYMHALAAAASSKGGRVLEVGFG
MAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPLS
EETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEVRPPEVPHGSPGSDLGWGWE
GAAGATLLPGEGPFLTPWVGWTVLVHLEIKVLCLAQWLPGAVAQVYNPSTVEGRGGQIA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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