NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS46242.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46242.1 Public Homo sapiens 2 TMEM214 24 110 108 CCDS HistoryNCBI Gene:54867Re-query CCDS DB by CCDS ID:46242.1Re-query CCDS DB by GeneID:54867See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46242.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000404032.7 ENSP00000384417.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000404032.7Link to Ensembl Protein Viewer:ENSP00000384417.3Re-query CCDS DB by Nucleotide ID:ENST00000404032Re-query CCDS DB by Protein ID:ENSP00000384417
Original member Current member NCBI NM_001083590.2 NP_001077059.1 Accepted alive Link to Nucleotide Sequence:NM_001083590.2Link to Protein Sequence:NP_001077059.1Re-query CCDS DB by Nucleotide ID:NM_001083590Re-query CCDS DB by Protein ID:NP_001077059Link to BLAST:NP_001077059.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001077059.1 644 Q6NUQ4-2 644 100% 0 0

Chromosomal Locations for CCDS 46242.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 27033016 27033166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27034067 27034266 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27035135 27035285 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27035970 27036052 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27036487 27036592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27036705 27036786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27037077 27037178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27037561 27037702 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27038146 27038237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27038484 27038532 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27038702 27038815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27039047 27039164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27039741 27039837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27040030 27040198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27040345 27040496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27040711 27040837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1935 nt):
ATGGCGACCAAGACGGCGGGCGTGGGGCGGTGGGAGGTAGTGAAGAAGGGTCGGCGGCCTGGGGTCGGCG
CCGGCGCCGGCGGCCGAGGAGGCGGCAGGAACCGCAGGGCGCTCGGGGAAGCAAACGGAGTGTGGAAATA
CGACCTGACCCCTGCAATCCAGACCACAAGCACCCTTTATGAGCGGGGCTTTGAGAATATCATGAAGCGG
CAGAATAAGGAGCAGGTCCCACCCCCTGCTGTGGAACCTAAGAAACCAGGGAACAAGAAGCAGCCAAAGA
AGGTGGCAACTCCTCCCAACCAAAACCAGAAGCAGGGCCGCTTCCGCAGCCTGGAGGAAGCACTGAAAGC
TCTGGATGTGGCAGACCTGCAGAAGGAACTGGACAAGAGCCAGAGTGTGTTCTCTGGAAACCCATCCATA
TGGTTGAAGGACCTGGCCAGCTATCTCAACTACAAGCTACAAGCTCCTCTAAGTGAACCCACGCTGAGCC
AGCATACTCATGGGGAGTCACTACATGGTTACCGCATCTGTATCCAGGCCATCCTGCAAGACAAGCCCAA
GATTGCCACGGCAAACCTAGGCAAGTTCCTGGAACTGCTGAGGTCCCACCAGAGCCGACCAGCAAAGTGT
CTCACCATCATGTGGGCCCTGGGTCAAGCAGGTTTTGCCAACCTCACCGAGGGACTGAAAGTGTGGCTGG
GGATCATGCTGCCTGTGCTGGGCATCAAGTCTCTGTCTCCCTTTGCCATCACATACCTGGATCGGCTGCT
CCTGATGCATCCCAACCTTACCAAGGGCTTCGGCATGATTGGCCCCAAGGACTTCTTCCCACTTCTGGAC
TTTGCCTATATGCCGAACAACTCCCTGACACCCAGCCTGCAGGAGCAGCTGTGTCAGCTCTACCCCCGAC
TGAAAGTGCTGGCATTTGGAGCAAAGCCGGATTCCACCCTGCATACCTACTTCCCTTCTTTCCTGTCCAG
AGCCACCCCTAGCTGTCCCCCTGAGATGAAGAAAGAGCTCCTGAGCAGCCTGACTGAGTGCCTGACGGTG
GACCCCCTCAGTGCCAGCGTCTGGAGGCAGCTGTACCCTAAGCACCTGTCACAGTCCAGCCTTCTGCTGG
AGCACTTGCTCAGCTCCTGGGAGCAGATTCCCAAGAAGGTACAGAAGTCTTTGCAAGAAACCATTCAGTC
CCTCAAGCTTACCAACCAGGAGCTGCTGAGGAAGGGTAGCAGTAACAACCAGGATGTCGTCACCTGTGAC
ATGGCCTGCAAGGGCCTGTTGCAGCAGGTTCAGGGTCCTCGGCTGCCCTGGACGCGGCTCCTCCTGTTGC
TGCTGGTCTTCGCTGTAGGCTTCCTGTGCCATGACCTCCGGTCACACAGCTCCTTCCAGGCCTCCCTTAC
TGGCCGGTTGCTTCGATCATCTGGCTTCTTACCTGCTAGCCAACAAGCGTGTGCCAAGCTCTACTCCTAC
AGTCTGCAAGGCTACAGCTGGCTGGGGGAGACACTGCCGCTCTGGGGCTCCCACCTGCTCACCGTGGTGC
GGCCCAGCTTGCAGCTGGCCTGGGCTCACACCAATGCCACAGTCAGCTTCCTTTCTGCCCACTGTGCCTC
TCACCTTGCGTGGTTTGGTGACAGTCTCACCAGTCTCTCTCAGAGGCTACAGATCCAGCTCCCCGATTCC
GTGAATCAGCTACTCCGCTATCTGAGAGAGCTGCCCCTGCTTTTCCACCAGAATGTGCTGCTGCCACTGT
GGCACCTCTTGCTTGAGGCCCTGGCCTGGGCCCAGGAGCACTGCCATGAGGCATGCAGAGGTGAGGTGAC
CTGGGACTGCATGAAGACACAGCTCAGTGAGGCTGTCCACTGGACCTGGCTTTGCCTACAGGACATTACA
GTGGCTTTCTTGGACTGGGCACTTGCCCTGATATCCCAGCAGTAG

Translation (644 aa):
MATKTAGVGRWEVVKKGRRPGVGAGAGGRGGGRNRRALGEANGVWKYDLTPAIQTTSTLYERGFENIMKR
QNKEQVPPPAVEPKKPGNKKQPKKVATPPNQNQKQGRFRSLEEALKALDVADLQKELDKSQSVFSGNPSI
WLKDLASYLNYKLQAPLSEPTLSQHTHGESLHGYRICIQAILQDKPKIATANLGKFLELLRSHQSRPAKC
LTIMWALGQAGFANLTEGLKVWLGIMLPVLGIKSLSPFAITYLDRLLLMHPNLTKGFGMIGPKDFFPLLD
FAYMPNNSLTPSLQEQLCQLYPRLKVLAFGAKPDSTLHTYFPSFLSRATPSCPPEMKKELLSSLTECLTV
DPLSASVWRQLYPKHLSQSSLLLEHLLSSWEQIPKKVQKSLQETIQSLKLTNQELLRKGSSNNQDVVTCD
MACKGLLQQVQGPRLPWTRLLLLLLVFAVGFLCHDLRSHSSFQASLTGRLLRSSGFLPASQQACAKLYSY
SLQGYSWLGETLPLWGSHLLTVVRPSLQLAWAHTNATVSFLSAHCASHLAWFGDSLTSLSQRLQIQLPDS
VNQLLRYLRELPLLFHQNVLLPLWHLLLEALAWAQEHCHEACRGEVTWDCMKTQLSEAVHWTWLCLQDIT
VAFLDWALALISQQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH