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Report for CCDS47011.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47011.1 Public Homo sapiens 4 ABLIM2 24 110 108 CCDS HistoryNCBI Gene:84448Re-query CCDS DB by CCDS ID:47011.1Re-query CCDS DB by GeneID:84448See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47011.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000505872.5 ENSP00000421283.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000505872.5Link to Ensembl Protein Viewer:ENSP00000421283.1Re-query CCDS DB by Nucleotide ID:ENST00000505872Re-query CCDS DB by Protein ID:ENSP00000421283
Original member Current member NCBI NM_001130086.2 NP_001123558.1 Accepted alive Link to Nucleotide Sequence:NM_001130086.2Link to Protein Sequence:NP_001123558.1Re-query CCDS DB by Nucleotide ID:NM_001130086Re-query CCDS DB by Protein ID:NP_001123558Link to BLAST:NP_001123558.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001123558.1 559 Q6H8Q1-7 559 100% 0 0

Chromosomal Locations for CCDS 47011.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 7966990 7967103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 7983264 7983344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 7983547 7983554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 7984839 7984893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 7992866 7992927 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 8008059 8008197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 8009050 8009102 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 8029656 8029776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 8036149 8036295 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 8045164 8045241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 8054188 8054246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 8060967 8061054 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 8077628 8077721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 8080676 8080802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 8088169 8088284 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 8097099 8097282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 8106494 8106637 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 8158680 8158689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1680 nt):
ATGAGTGCAGTGTCGCAGCCCCAGGCTGCTCCCAGCCCGCTGGAGAAGTCGCCCAGCACGGCGATCCTGT
GCAACACGTGTGGGAATGTGTGCAAGGGCGAGGTGCTGCGGGTGCAGGACAAGTACTTCCACATCAAGTG
CTTCGTCTGTAAAGCATGTGGCTGCGACCTGGCCGAGGGCGGCTTCTTCGTGCGGCAGGGCGAGTACATC
TGCACGCTGGACTACCAGAGGCTCTACGGCACCCGCTGCTTCAGCTGCGACCAGTTCATTGAGGGTGAGG
TGGTGTCGGCGCTGGGCAAGACCTACCACCCCGACTGCTTCGTGTGTGCCGTCTGCCGGCTGCCCTTCCC
CCCCGGGGACCGAGTGACCTTCAACGGGAAGGAATGCATGTGCCAGAAGTGTTCCCTGCCCGTATCGGTG
GGCAGCAGCGCGCACCTGTCCCAGGGCCTCCGAAGTTGTGGGGGCTGCGGCACAGAAATCAAGAATGGCC
AGGCCCTGGTAGCCTTGGACAAGCACTGGCACTTGGGCTGTTTTAAGTGCAAGAGCTGTGGGAAGCTCCT
GAATGCCGAGTACATCAGCAAGGATGGGCTGCCCTACTGCGAAGCTGACTATCACGCCAAGTTCGGCATC
CGCTGTGACAGCTGTGAGAAATACATCACGGGGCGCGTGCTGGAGGCCGGAGAGAAGCACTACCACCCTT
CCTGCGCGCTATGTGTCAGGTGCGGCCAGATGTTTGCAGAAGGCGAAGAGATGTATCTTCAAGGTTCCTC
CATCTGGCATCCGGCGTGTCGACAAGCAGCCAGAACTGAAGACAGAAACAAGGAAACCAGAACTTCCTCA
GAGAGCATCATTTCTGTCCCTGCTTCCAGCACCTCAGGGTCTCCGAGCCGTGTGATTTATGCCAAGCTTG
GTGGTGAGATCCTGGACTACAGGGACTTGGCAGCCCTTCCTAAAAGTAAGGCCATCTATGACATCGACCG
CCCCGACATGATCTCCTACTCACCCTACATCAGCCACTCTGCAGGGGACAGGCAGAGCTACGGCGAGGGG
GATCAGGATGACCGGTCCTACAAGCAGTGTCGGACCTCCAGCCCAAGCTCCACTGGGTCGGTTAGCCTCG
GGCGCTACACTCCGACCTCACGGTCACCACAGCACTACAGCCGTCCAGCTGCCAGGCGATCGGATGGGGA
GGATGGAAGCTTGGACCAGGATAACAGGAAGAAGAGCAGCTGGCTGATGCTCAAGGGGGATGCAGACACA
AGGACCAATTCTCCAGACCTGGACACCCAGTCCTTGTCCCACAGCAGCGGGACCGACAGAGACCCTCTCC
AAAGGATGGCAGGGGACAGCTTTCACTCACGATTCCCCTATTCCAAATCTGACCCTCTCCCAGGACATGG
AAAGAATGGCTTGGACCAGCGGAATGCCAATCTGGCCCCCTGTGGAGCAGACCCGGATGCCAGCTGGGGC
ATGCGAGAATACAAGATCTATCCGTATGACTCCCTCATCGTCACAAACCGAATTCGCGTGAAACTGCCCA
AAGACGTGGACCGGACGAGACTGGAGAGACACTTGTCGCCCGAGGAGTTCCAGGAAGTGTTTGGGATGAG
CATCGAGGAGTTTGACCGCCTGGCCCTCTGGAAGAGGAATGACCTTAAGAAGAAAGCCCTTTTGTTCTGA

Translation (559 aa):
MSAVSQPQAAPSPLEKSPSTAILCNTCGNVCKGEVLRVQDKYFHIKCFVCKACGCDLAEGGFFVRQGEYI
CTLDYQRLYGTRCFSCDQFIEGEVVSALGKTYHPDCFVCAVCRLPFPPGDRVTFNGKECMCQKCSLPVSV
GSSAHLSQGLRSCGGCGTEIKNGQALVALDKHWHLGCFKCKSCGKLLNAEYISKDGLPYCEADYHAKFGI
RCDSCEKYITGRVLEAGEKHYHPSCALCVRCGQMFAEGEEMYLQGSSIWHPACRQAARTEDRNKETRTSS
ESIISVPASSTSGSPSRVIYAKLGGEILDYRDLAALPKSKAIYDIDRPDMISYSPYISHSAGDRQSYGEG
DQDDRSYKQCRTSSPSSTGSVSLGRYTPTSRSPQHYSRPAARRSDGEDGSLDQDNRKKSSWLMLKGDADT
RTNSPDLDTQSLSHSSGTDRDPLQRMAGDSFHSRFPYSKSDPLPGHGKNGLDQRNANLAPCGADPDASWG
MREYKIYPYDSLIVTNRIRVKLPKDVDRTRLERHLSPEEFQEVFGMSIEEFDRLALWKRNDLKKKALLF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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