NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS4738.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4738.1 Public Homo sapiens 6 FKBPL 24 110 108 CCDS HistoryNCBI Gene:63943Re-query CCDS DB by CCDS ID:4738.1Re-query CCDS DB by GeneID:63943See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4738.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000375156.4 ENSP00000364298.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000375156.4Link to Ensembl Protein Viewer:ENSP00000364298.3Re-query CCDS DB by Nucleotide ID:ENST00000375156Re-query CCDS DB by Protein ID:ENSP00000364298
Original member Current member NCBI NM_022110.4 NP_071393.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_022110.4Link to Protein Sequence:NP_071393.2Re-query CCDS DB by Nucleotide ID:NM_022110Re-query CCDS DB by Protein ID:NP_071393Link to BLAST:NP_071393.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_071393.2 349 Q9UIM3 349 100% 0 0

Chromosomal Locations for CCDS 4738.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 32128731 32129780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1050 nt):
ATGGAGACGCCACCAGTCAATACAATTGGAGAAAAGGACACCTCTCAGCCGCAACAAGAGTGGGAAAAGA
ACCTTCGGGAGAACCTTGATTCAGTTATTCAGATTAGGCAGCAGCCCCGAGACCCTCCTACCGAAACGCT
TGAGCTGGAAGTAAGCCCAGATCCAGCCAGCCAAATTCTAGAGCATACTCAAGGAGCTGAAAAACTGGTT
GCTGAACTTGAAGGAGACTCTCATAAGTCTCATGGATCAACCAGTCAGATGCCAGAGGCCCTTCAAGCTT
CTGATCTCTGGTACTGCCCCGATGGGAGCTTTGTCAAGAAGATCGTAATCCGTGGCCATGGCTTGGACAA
ACCCAAACTAGGCTCCTGCTGCCGGGTACTGGCTTTGGGGTTTCCTTTCGGATCAGGGCCGCCAGAGGGC
TGGACAGAGCTAACTATGGGCGTAGGGCCATGGAGGGAGGAAACTTGGGGGGAGCTCATAGAGAAATGCT
TGGAGTCCATGTGTCAAGGTGAGGAAGCAGAGCTTCAGCTGCCTGGGCACTCTGGACCTCCTGTCAGGCT
CACACTGGCATCCTTCACTCAAGGCCGAGACTCCTGGGAGCTGGAGACTAGCGAGAAGGAAGCCCTGGCC
AGGGAAGAACGTGCAAGGGGCACAGAACTATTTCGAGCTGGGAACCCTGAAGGAGCTGCCCGATGCTATG
GACGGGCTCTTCGGCTGCTCCTGACTTTACCCCCACCTGGCCCTCCAGAACGAACTGTCCTTCATGCCAA
TCTGGCTGCCTGTCAGTTGTTGCTAGGGCAGCCTCAGTTGGCAGCCCAGAGCTGTGACCGGGTGTTGGAG
CGGGAGCCTGGCCATTTAAAGGCCTTATACCGAAGGGGGGTTGCCCAGGCTGCCCTTGGGAACCTGGAAA
AAGCAACTGCTGACCTCAAGAAGGTGCTGGCGATAGATCCCAAAAACCGGGCAGCCCAGGAGGAACTGGG
GAAGGTGGTCATTCAGGGGAAGAACCAGGATGCAGGGCTGGCTCAGGGTCTGCGCAAGATGTTTGGCTGA

Translation (349 aa):
METPPVNTIGEKDTSQPQQEWEKNLRENLDSVIQIRQQPRDPPTETLELEVSPDPASQILEHTQGAEKLV
AELEGDSHKSHGSTSQMPEALQASDLWYCPDGSFVKKIVIRGHGLDKPKLGSCCRVLALGFPFGSGPPEG
WTELTMGVGPWREETWGELIEKCLESMCQGEEAELQLPGHSGPPVRLTLASFTQGRDSWELETSEKEALA
REERARGTELFRAGNPEGAARCYGRALRLLLTLPPPGPPERTVLHANLAACQLLLGQPQLAAQSCDRVLE
REPGHLKALYRRGVAQAALGNLEKATADLKKVLAIDPKNRAAQEELGKVVIQGKNQDAGLAQGLRKMFG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH