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Report for CCDS47581.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47581.1 Public Homo sapiens 7 H2AZ2 24 110 108 CCDS HistoryNCBI Gene:94239Re-query CCDS DB by CCDS ID:47581.1Re-query CCDS DB by GeneID:94239See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47581.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000381124.9 ENSP00000370516.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000381124.9Link to Ensembl Protein Viewer:ENSP00000370516.5Re-query CCDS DB by Nucleotide ID:ENST00000381124Re-query CCDS DB by Protein ID:ENSP00000370516
Original member Current member NCBI NM_201516.3 NP_958924.1 Accepted alive Link to Nucleotide Sequence:NM_201516.3Link to Protein Sequence:NP_958924.1Re-query CCDS DB by Nucleotide ID:NM_201516Re-query CCDS DB by Protein ID:NP_958924Link to BLAST:NP_958924.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_958924.1 66 Q71UI9-5 66 100% 0 0

Chromosomal Locations for CCDS 47581.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 44834557 44834562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44840899 44841012 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44843277 44843354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44847969 44847971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (201 nt):
ATGGCTGGAGGCAAAGCTGGAAAGGACAGTGGGAAGGCCAAGGCTAAGGCAGTATCTCGCTCACAGAGAG
CTGGGCTACAGTTTCCTGTGGGCCGCATCCACAGACACTTGAAGACTCGCACCACAAGCCATGGAAGGGT
GGGTGCCACTGCTGCCGTGTACAGTGCTGCGATTCTGGAGTACCTCACTGCAGAGGTGTGA

Translation (66 aa):
MAGGKAGKDSGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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