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Report for CCDS47625.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47625.1 Public Homo sapiens 7 GNAT3 24 110 108 CCDS HistoryNCBI Gene:346562Re-query CCDS DB by CCDS ID:47625.1Re-query CCDS DB by GeneID:346562See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47625.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000398291.4 ENSP00000381339.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000398291.4Link to Ensembl Protein Viewer:ENSP00000381339.3Re-query CCDS DB by Nucleotide ID:ENST00000398291Re-query CCDS DB by Protein ID:ENSP00000381339
Original member Current member NCBI NM_001102386.3 NP_001095856.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001102386.3Link to Protein Sequence:NP_001095856.1Re-query CCDS DB by Nucleotide ID:NM_001102386Re-query CCDS DB by Protein ID:NP_001095856Link to BLAST:NP_001095856.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001095856.1 354 A8MTJ3 354 100% 0 0

Chromosomal Locations for CCDS 47625.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 80458671 80458861 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80462159 80462312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80462502 80462631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80474251 80474379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80478841 80478998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80488535 80488676 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80494605 80494647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80511809 80511926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1065 nt):
ATGGGAAGTGGAATTAGTTCAGAGAGCAAGGAGTCAGCCAAAAGATCAAAAGAACTGGAGAAAAAGCTTC
AGGAGGATGCTGAGCGAGATGCAAGAACCGTAAAGCTGCTACTATTAGGAGCAGGAGAATCTGGGAAAAG
TACTATTGTTAAACAAATGAAGATCATCCATAAGAATGGTTACAGTGAGCAAGAATGCATGGAGTTCAAA
GCAGTAATTTACAGTAATACATTGCAATCCATCCTAGCTATTGTGAAAGCCATGACTACCCTTGGAATTG
ATTATGTAAATCCCAGAAGTGCAGAGGACCAACGACAACTTTATGCAATGGCAAATACCCTGGAAGATGG
TGGCATGACACCTCAACTGGCTGAGGTAATAAAACGGCTGTGGAGAGATCCAGGAATTCAGGCCTGCTTT
GAAAGGGCATCTGAATATCAGCTCAATGACTCAGCAGCTTACTACCTTAATGATTTAGATAGAATAACAG
CATCTGGGTATGTGCCAAATGAACAAGATGTTCTCCATTCTCGAGTGAAAACGACTGGAATCATTGAAAC
TCAATTCTCCTTTAAAGACTTGCACTTCAGGATGTTTGATGTAGGTGGACAGAGATCTGAGAGAAAGAAG
TGGATTCACTGCTTTGAAGGAGTTACATGCATTATATTTTGTGCTGCACTTAGTGCCTATGACATGGTCC
TCGTGGAAGACGAAGAAGTGAATAGAATGCATGAAAGCCTTCACCTGTTCAACAGTATCTGTAATCACAA
GTATTTTTCAACAACCTCCATTGTCCTGTTCCTCAACAAAAAAGATATCTTTCAAGAAAAGGTAACCAAG
GTGCATCTTAGTATCTGCTTTCCAGAATACACTGGGCCAAATACATTTGAAGATGCAGGAAACTACATCA
AGAACCAGTTTCTAGACCTGAATTTAAAAAAAGAAGATAAGGAAATTTATTCCCACATGACCTGTGCTAC
TGACACCCAAAATGTCAAGTTTGTGTTTGACGCAGTTACAGATATAATAATCAAAGAGAATCTAAAAGAC
TGTGGGCTTTTCTAA

Translation (354 aa):
MGSGISSESKESAKRSKELEKKLQEDAERDARTVKLLLLGAGESGKSTIVKQMKIIHKNGYSEQECMEFK
AVIYSNTLQSILAIVKAMTTLGIDYVNPRSAEDQRQLYAMANTLEDGGMTPQLAEVIKRLWRDPGIQACF
ERASEYQLNDSAAYYLNDLDRITASGYVPNEQDVLHSRVKTTGIIETQFSFKDLHFRMFDVGGQRSERKK
WIHCFEGVTCIIFCAALSAYDMVLVEDEEVNRMHESLHLFNSICNHKYFSTTSIVLFLNKKDIFQEKVTK
VHLSICFPEYTGPNTFEDAGNYIKNQFLDLNLKKEDKEIYSHMTCATDTQNVKFVFDAVTDIIIKENLKD
CGLF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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