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Report for CCDS47670.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47670.1 Public Homo sapiens 7 IFT22 24 110 108 CCDS HistoryNCBI Gene:64792Re-query CCDS DB by CCDS ID:47670.1Re-query CCDS DB by GeneID:64792See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47670.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000437644.2 ENSP00000390770.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000437644.2Link to Ensembl Protein Viewer:ENSP00000390770.2Re-query CCDS DB by Nucleotide ID:ENST00000437644Re-query CCDS DB by Protein ID:ENSP00000390770
Original member Current member NCBI NM_001130820.3 NP_001124292.1 Accepted alive Link to Nucleotide Sequence:NM_001130820.3Link to Protein Sequence:NP_001124292.1Re-query CCDS DB by Nucleotide ID:NM_001130820Re-query CCDS DB by Protein ID:NP_001124292Link to BLAST:NP_001124292.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001124292.1 155 Q9H7X7-2 155 100% 0 0

Chromosomal Locations for CCDS 47670.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 101315134 101315282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101316340 101316542 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101318956 101319032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101321671 101321709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (468 nt):
ATGCTGAAAGCCAAGATCCTCTTCGTGGGGCCTTGCGAGAGTGGAAAAACTGTTTTGGCCAACTTTCTGA
CAGAATCTTCTGACATCACTGAATACAGCCCAACCCAAGGAGTGAGGTTTGAGTCCTGCTGGCCGGCCCT
GATGAAGGATGCTCATGGAGTGGTGATCGTCTTCAATGCTGACATCCCAAGCCACCGGAAGGAAATGGAG
ATGTGGTATTCCTGCTTTGTCCAACAGCCGTCCTTACAGGACACACAGTGTATGCTAATTGCACACCACA
AACCAGGCTCTGGAGATGATAAAGGAAGCCTGTCTTTGTCGCCACCCTTGAACAAGCTGAAGCTGGTGCA
CTCAAACCTGGAAGATGACCCTGAGGAGATCCGGATGGAATTCATAAAGTATTTAAAAAGCATAATCAAC
TCCATGTCTGAGAGCAGAGACAGGGAGGAGATGTCAATTATGACCTAG

Translation (155 aa):
MLKAKILFVGPCESGKTVLANFLTESSDITEYSPTQGVRFESCWPALMKDAHGVVIVFNADIPSHRKEME
MWYSCFVQQPSLQDTQCMLIAHHKPGSGDDKGSLSLSPPLNKLKLVHSNLEDDPEEIRMEFIKYLKSIIN
SMSESRDREEMSIMT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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