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Report for CCDS48325.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48325.1 Public Mus musculus 1 Cops9 23 108 98 CCDS HistoryNCBI Gene:66915Re-query CCDS DB by CCDS ID:48325.1Re-query CCDS DB by GeneID:66915See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 48325.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000097642.3 ENSMUSP00000095247.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000097642.3Link to Ensembl Protein Viewer:ENSMUSP00000095247.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000097642Re-query CCDS DB by Protein ID:ENSMUSP00000095247
Original member Current member NCBI NM_001163425.1 NP_001156897.1 Accepted alive Link to Nucleotide Sequence:NM_001163425.1Link to Protein Sequence:NP_001156897.1Re-query CCDS DB by Nucleotide ID:NM_001163425Re-query CCDS DB by Protein ID:NP_001156897Link to BLAST:NP_001156897.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001156897.1 57 Q3U898 57 100% 0 0

Chromosomal Locations for CCDS 48325.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 92637366 92637403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 92639687 92639759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 92641880 92641942 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (174 nt):
ATGAAACCCGCAGTGGATGAGATGTTCCCCGAGGGCGCGGGGCCCTATGTGGACCTGGATGAGGCTGGAG
GTAGCACCGGGCTTTTGATGGACCTGGCAGCCAATGAGAAGGCCGTTCATGCAGACTTTTTTAATGATTT
TGAAGACCTTTTTGATGATGATGATGTCCAGTGA

Translation (57 aa):
MKPAVDEMFPEGAGPYVDLDEAGGSTGLLMDLAANEKAVHADFFNDFEDLFDDDDVQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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