NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS48644.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48644.1 Public Mus musculus 10 Celf5 23 108 98 CCDS HistoryNCBI Gene:319586Re-query CCDS DB by CCDS ID:48644.1Re-query CCDS DB by GeneID:319586See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 48644.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000118763.7 ENSMUSP00000113675.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000118763.7Link to Ensembl Protein Viewer:ENSMUSP00000113675.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000118763Re-query CCDS DB by Protein ID:ENSMUSP00000113675
Original member NCBI NM_176954.3 NP_795928.2 Updated not alive Link to Nucleotide Sequence:NM_176954.3Link to Protein Sequence:NP_795928.2Re-query CCDS DB by Nucleotide ID:NM_176954Re-query CCDS DB by Protein ID:NP_795928
Current member NCBI NM_176954.4 NP_795928.2 Accepted alive Link to Nucleotide Sequence:NM_176954.4Link to Protein Sequence:NP_795928.2Re-query CCDS DB by Nucleotide ID:NM_176954Re-query CCDS DB by Protein ID:NP_795928Link to BLAST:NP_795928.2

Chromosomal Locations for CCDS 48644.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 81462326 81462341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81462669 81462771 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81464340 81464420 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81465967 81466029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81466925 81467071 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81467156 81467297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81467985 81468131 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81469444 81469523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81470629 81470757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81471306 81471357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81476869 81476951 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81482461 81482605 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1188 nt):
ATGAAGGACCTGGACGCCATCAAGCTCTTCGTGGGCCAGATCCCGCGCCACTTGCACGAACAGGACCTCA
AGCCGCTGTTCGAGCAGTTCGGCCGCATCTACGAGCTGACGGTGCTCAAGGACCCGCACACCGGCGTGCA
CAAAGGCTGTGCCTTCCTCACATACTGCGCCAGGGACTCTGCCATCAAAGCTCAGACAGCCTTGCACGAG
CAGAAGACCCTGCCAGGGATGGCGCGGCCGATCCAGGTGAAACCGGCAGACAGTGAAAGCCGTGGAGGTA
GGGACCGGAAGCTGTTCGTGGGTATGCTCAACAAGCAGCAGTCAGAGGAAGACGTGCTCAGGCTCTTCCA
GCCCTTTGGCGTCATAGACGAGTGCACAGTGCTTCGAGGACCAGATGGCAGCAGCAAAGGCTGTGCCTTC
GTGAAGTTTTCTTCCCACACAGAGGCCCAGGCTGCCATCCATGCCTTGCATGGCAGCCAGACTATGCCGG
GAGCGTCCTCCAGCCTGGTGGTCAAGTTTGCCGACACGGATAAAGAGCGGACATTGCGGCGTATGCAGCA
GATGGTTGGCCAGCTGGGCATCCTGACGCCGTCCCTCACCCTGCCCTTCAGCCCCTACAGTGCCTACGCC
CAGGCTCTCATGCAGCAACAGACAACAGTGTTGTCCACCTCTGGCAGCTACCTGAGCCCCGGTGTGGCCT
TCCCTCCCTGCCATATCCAGCAGATTGGTGCCGTCAGCCTTAACGGTCTGCCTGCCACGCCCATCGCTCC
TGCCTCTGGGCTACACTCACCCCCACTGCTAGGCACTGCCGCTGTTCCCGGCCTGATGGCGCCCATTCCC
AATGGCTTCCCCGGCGTCCTGCCCTTTCCCGGGAGTCACCCTGCCCTGGAGACTGTGTATGCCAATGGCC
TTGTGCCCTACCCAGCTCAGAGCCCCACTGTGGCAGAGACCCTCCATCCTGCCTTCTCCGGAGTCCAGCA
GTACACAGCCATGTATCCCACCGCGGCCATCGCGCCCGTGGCACACAGCGTTCCGCAGCCTCCGCACCTC
CTGCAGCAGCAGCGCGAAGGAGTTTGGAGACACGGAGCTGACCCAGATGTTCCTCCCCTTCGGCAATATC
ATCTCCTCCAAGGTGTTTATGGATCGGGCTACCAACCAGAGCAAGTGTTTCGGATTCGTGAGCTTTGA

Translation (395 aa):
MKDLDAIKLFVGQIPRHLHEQDLKPLFEQFGRIYELTVLKDPHTGVHKGCAFLTYCARDSAIKAQTALHE
QKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAF
VKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGILTPSLTLPFSPYSAYA
QALMQQQTTVLSTSGSYLSPGVAFPPCHIQQIGAVSLNGLPATPIAPASGLHSPPLLGTAAVPGLMAPIP
NGFPGVLPFPGSHPALETVYANGLVPYPAQSPTVAETLHPAFSGVQQYTAMYPTAAIAPVAHSVPQPPHL
LQQQREGVWRHGADPDVPPLRQYHLLQGVYGSGYQPEQVFRIREL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH