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Report for CCDS48710.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48710.1 Public Mus musculus 10 Atp23 23 108 98 CCDS HistoryNCBI Gene:68876Re-query CCDS DB by CCDS ID:48710.1Re-query CCDS DB by GeneID:68876See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 48710.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000168520.2 ENSMUSP00000128382.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000168520.2Link to Ensembl Protein Viewer:ENSMUSP00000128382.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000168520Re-query CCDS DB by Protein ID:ENSMUSP00000128382
Original member Current member NCBI NM_001159559.1 NP_001153031.1 Accepted alive Link to Nucleotide Sequence:NM_001159559.1Link to Protein Sequence:NP_001153031.1Re-query CCDS DB by Nucleotide ID:NM_001159559Re-query CCDS DB by Protein ID:NP_001153031Link to BLAST:NP_001153031.1

Chromosomal Locations for CCDS 48710.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 126887491 126887694 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 126891640 126891723 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 126894225 126894362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 126898887 126898968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 126899581 126899626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 126901102 126901288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (741 nt):
ATGGCAGGAGCTCCGGGCGGCGGCGAGCTCGGCCCTGCGGCTGGCGAGCCACTGCTGCAGCGACCCGACT
CTGGCCAGGGCTCGCCTGAGCCGCCGGCCCACGGGAAGCCCCAGCAGGGCTTCCTCTCCAGCCTCTTCAC
CCGGGACCAGAGTTGTCCGCTCATGCTCCAGAAGACGCTGGATACCAATCCATATGTCAAACTTCTACTT
GATGCTATGAAACACTCAGGTTGTGCTGTGAACAGGGGAAGACACTTTTCCTGCGAAGTCTGCGATGGAA
ACGTCAGCGGAGGCTTTGATGCGTCTACGTCTCAGATTGTTTTGTGCGAGAATAACATCCGGAATCAGGC
GCACATGGGCAGGGTCGTCACCCACGAGCTCATTCACGCGTTTGACCACTGCCGGGCTCACGTCCACTGG
TTCACCAACATCAGACATCTGGCGTGCTCGGAGATTCGAGCCGCAAGCCTCAGCGGGGACTGCTCCCTTG
TGAACGAACTCTTCAGGCTGCGTTTTGGATTAAAGCAACATCATCAGACTTGCGTGCGGGACAGGGCTGT
TCTCTCTATCTTGGCTGTCCGGAACGTCAGCAGAGAGGAGGCCCAGAAGGCTGTGGATGAAGTCTTCCAG
ACCTGTTTCAATGACCGGGAGCCCTTCGGCAGGATCCCACATAACCAGACGTATGCCAGATACGCTCACA
GGGACTTTCAGAACCGGGACCGCTACTACTCCAACATATGA

Translation (246 aa):
MAGAPGGGELGPAAGEPLLQRPDSGQGSPEPPAHGKPQQGFLSSLFTRDQSCPLMLQKTLDTNPYVKLLL
DAMKHSGCAVNRGRHFSCEVCDGNVSGGFDASTSQIVLCENNIRNQAHMGRVVTHELIHAFDHCRAHVHW
FTNIRHLACSEIRAASLSGDCSLVNELFRLRFGLKQHHQTCVRDRAVLSILAVRNVSREEAQKAVDEVFQ
TCFNDREPFGRIPHNQTYARYAHRDFQNRDRYYSNI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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