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Report for CCDS48719.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48719.1 Public Mus musculus 10 Nab2 23 108 98 CCDS HistoryNCBI Gene:17937Re-query CCDS DB by CCDS ID:48719.1Re-query CCDS DB by GeneID:17937See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 48719.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000099157.3 ENSMUSP00000096761.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000099157.3Link to Ensembl Protein Viewer:ENSMUSP00000096761.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000099157Re-query CCDS DB by Protein ID:ENSMUSP00000096761
Original member Current member NCBI NM_001122895.1 NP_001116367.1 Accepted alive Link to Nucleotide Sequence:NM_001122895.1Link to Protein Sequence:NP_001116367.1Re-query CCDS DB by Nucleotide ID:NM_001122895Re-query CCDS DB by Protein ID:NP_001116367Link to BLAST:NP_001116367.1

Chromosomal Locations for CCDS 48719.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 127661670 127661779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127663132 127663264 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127663350 127663401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127663740 127663873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127664265 127665138 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127666376 127666458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1386 nt):
ATGCACAGAGCTCCCTCTCCCACAGCGGAACAGCCACCTGGCAGAGGGGATAACACACGCCGGACCCCGC
AACCCAGATTCAAGGCAAGTGCCCCAGCCATGGCACTGCCTCGGACACTGGGTGAGCTACAGCTGTATCG
GGTCCTGCAACGCGCCAACCTCCTCTCTTACTACGAGACCTTCATCCAGCAGGGAGGAGATGATGTACAG
CAGCTGTGTGAGGCTGGCGAGGAGGAGTTCCTGGAAATCATGGCACTCGTGGGCATGGCCACCAAACCAC
TCCATGTCCGACGTCTACAGAAGGCTCTGAGAGAATGGGCCACCAATCCAGGGCTCTTCAGCCAACCAGT
GCCTGCTGTGCCCGTCTCCAGCATCCCACTTTTCAAGATCTCTGAGACAGCTGGTACCCGGAAAGGGAGC
ATGAGCAATGGGCACGGCAGCCCAGGAGAAAAGGCGGGCAGTGCTCGAAGCTTTAGCCCCAAGAGTCCCC
TCGAACTTGGAGAGAAGTTGTCGCCACTCCCTGGAGGACCTGGGGCAGGGGATCCCCGGATCTGGCCAGG
CCAGAGCACTCCAGAATCTGATGTTGGAGCAGGGGGAGAAGAGGAGGCCGGGTCTCCCCCTTTCTCCCCA
CCTGCAGGGGGAGGAGTCTCTGAAGGGCCTGGGGTTGGGGGGGTGGCAGCTGGTGGTGCAGGGGGTGGTC
CAGACCGCCTGGAACCAGAGATGGTGCGAATGGTGGTGGAGAGTGTGGAGAGGATCTTCCGGAGTTTCCC
CAGGGGTGACACTGGAGAGATCGCATCCCTGTTGAAGCTGAATAAGAAGCTGGCGCGGAGCGTGGGGCAC
ATCTTTGAGATGGACGATCATGACGCCCAGAAGGAAGAGGAGATCCGGAAGTACAGCGTCATCTACGGCC
GCCTGGACTCCAAAAGGCGGGAGGGCAAACAGCTTAGCTTGCATGAGCTGACCATCAACGAGGCTGCTGC
CCAGTTCTGCATGAGGGACAACACTCTTTTACTGCGAAGGGTAGAACTCTTCTCACTGTCCCGACAAGTA
GCCCGAGAGAGCACCTATCTTTCTTCCTTGAAGGGATCCAGGCTTCACTCTGAAGAATTGGGAGGCCCAC
CACTGAAGAAACTGAAACAAGAGGTTGGAGAACAGAGTCACAATGAAATCCAGCAGCCTCCTCCAGGCCC
TGAGTCCTATGCACCCCCATACCGCCCCAGCCTAGAGGAGGACAGCGCCAGTCTGTCTGGGGAGAGCCTG
GATGGCCACTTGCAGGAGTTCGAGGAGGGGTTGCTGGACCGCTGCCCTGCCCCGGGACCTCATCCTGCTC
TGGTGGAGGGCCGCAGGAGCAGCGTTAAAGTGGAGGCAGAAGCCAGCCGGCAGTGA

Translation (461 aa):
MHRAPSPTAEQPPGRGDNTRRTPQPRFKASAPAMALPRTLGELQLYRVLQRANLLSYYETFIQQGGDDVQ
QLCEAGEEEFLEIMALVGMATKPLHVRRLQKALREWATNPGLFSQPVPAVPVSSIPLFKISETAGTRKGS
MSNGHGSPGEKAGSARSFSPKSPLELGEKLSPLPGGPGAGDPRIWPGQSTPESDVGAGGEEEAGSPPFSP
PAGGGVSEGPGVGGVAAGGAGGGPDRLEPEMVRMVVESVERIFRSFPRGDTGEIASLLKLNKKLARSVGH
IFEMDDHDAQKEEEIRKYSVIYGRLDSKRREGKQLSLHELTINEAAAQFCMRDNTLLLRRVELFSLSRQV
ARESTYLSSLKGSRLHSEELGGPPLKKLKQEVGEQSHNEIQQPPPGPESYAPPYRPSLEEDSASLSGESL
DGHLQEFEEGLLDRCPAPGPHPALVEGRRSSVKVEAEASRQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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