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Report for CCDS48721.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48721.1 Public Mus musculus 10 Nemp1 23 108 98 CCDS HistoryNCBI Gene:210035Re-query CCDS DB by CCDS ID:48721.1Re-query CCDS DB by GeneID:210035See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 48721.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000118612.7 ENSMUSP00000113337.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000118612.7Link to Ensembl Protein Viewer:ENSMUSP00000113337.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000118612Re-query CCDS DB by Protein ID:ENSMUSP00000113337
Original member Current member NCBI NM_173732.3 NP_776093.1 Accepted alive Link to Nucleotide Sequence:NM_173732.3Link to Protein Sequence:NP_776093.1Re-query CCDS DB by Nucleotide ID:NM_173732Re-query CCDS DB by Protein ID:NP_776093Link to BLAST:NP_776093.1

Chromosomal Locations for CCDS 48721.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 127677098 127677227 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127688233 127688348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127689225 127689444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127690861 127690933 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127692968 127693061 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127693484 127693598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127694429 127694658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (978 nt):
ATGGCGGGAGGAATCAAAGTGTCGGTGTGGTCGGCGGTTGGTCCAGGGCCCCGGTGCTGGGGGGCCGGGG
GCGGCGGCGGCGCCACATGGCTGCTCTTGGTCGTCGCCGGCTGCGTGGTCTGCGGCTCAGCTGATGTAAA
TGTGGTCATGCTTCAGGAATCCCAAGTTGATATGAATTCCAGTCAACAATTCTGTTATAAAAATGTGCTT
ATCCCAAAGTGGCATGATATATGGACACGGATACAGGTTCGGGTAAATAGTTCCAAGTTGGTCCGAGTTA
CCCAGGTGGACAATGAGGAGAAGCTGAAGGAGCTAGAGCAGTTTAGTATCTGGAACTTTTTTTCTTCTTT
TTTAAAAGAGAAATTGAATGACACCTATGTTAACGTGGGTCTGTACAGCACTAAAACCTGCCTCAAGGTT
GAGATGATAGAGAAGGACACCACGTACAGTGTCACTGTGACCCGGAGATTTGACCCCAAACTCTTCCTTG
TTTTCCTCCTCGGACTGACACTGTTTTTTTGTGGAGACTTGTTGAGCAGGAGTCAAATTTTCTACTATTC
CACTGGGATGAGTGTGGGAATCGTGGCCTCTCTCTTAATCGTCATTTTTATGATCTCTAAGTTTATGCCC
AAGAGAAGCCCCATTTACGTCATCCTGGTAGGAGGCTGGTCCTTCTCTCTGTACCTCATTCAGCTAGTTT
TTAAGAATTTACAGGAGATATGGAGGAGTTACTGGCATTATCTTCTAAGCTACATCCTCACAGTTGGATT
CATGAGTTTTGCAGTGTGCTACAAATATGGGCCCCTGGAAAATGAACGAAGCATTAACCTGCTGACCTGG
ACGCTGCAGCTGCTGGGCCTGGGACTCATGTATTCCAGTATCCAGATCCCGCACGTTGCCTTTGCTCTCA
TCGTCATTGCACTGTGCACTAAGAACCTGGAATACCCTATCCACTGGCTGTGCAGCACCTACAGGTGA

Translation (325 aa):
MAGGIKVSVWSAVGPGPRCWGAGGGGGATWLLLVVAGCVVCGSADVNVVMLQESQVDMNSSQQFCYKNVL
IPKWHDIWTRIQVRVNSSKLVRVTQVDNEEKLKELEQFSIWNFFSSFLKEKLNDTYVNVGLYSTKTCLKV
EMIEKDTTYSVTVTRRFDPKLFLVFLLGLTLFFCGDLLSRSQIFYYSTGMSVGIVASLLIVIFMISKFMP
KRSPIYVILVGGWSFSLYLIQLVFKNLQEIWRSYWHYLLSYILTVGFMSFAVCYKYGPLENERSINLLTW
TLQLLGLGLMYSSIQIPHVAFALIVIALCTKNLEYPIHWLCSTYR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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