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Report for CCDS49300.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
49300.1 Public Mus musculus 13 Zfp455 23 108 98 CCDS HistoryNCBI Gene:218311Re-query CCDS DB by CCDS ID:49300.1Re-query CCDS DB by GeneID:218311See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 49300.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000120861.7 ENSMUSP00000112546.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000120861.7Link to Ensembl Protein Viewer:ENSMUSP00000112546.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000120861Re-query CCDS DB by Protein ID:ENSMUSP00000112546
Original member Current member NCBI NM_001048204.1 NP_001041669.1 Accepted alive Link to Nucleotide Sequence:NM_001048204.1Link to Protein Sequence:NP_001041669.1Re-query CCDS DB by Nucleotide ID:NM_001048204Re-query CCDS DB by Protein ID:NP_001041669Link to BLAST:NP_001041669.1

Chromosomal Locations for CCDS 49300.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 67194589 67194594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 67198533 67198659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 67199149 67199244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 67206899 67208055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1386 nt):
ATGGAGGAAATGTTGTCCTTCTGGGATGTGGCCATTGATTTCTCTCCAGAAGAGTGGGAATGCCTGGAGC
CTGCTCAGTGGGATCTGTACAGGGACGTGATGCTGGAGAATTTCAGCCACCTTGTGTTCCTGGGTCTTGC
TGTCTCTAAGCCATTCCTGGTGACATTTCTGGAGCAAAGACAAGGGCCTTGGGATATGAAGAGACAAGCA
GCAGCCACTGTGTACCCAGGAATAATACCTAATGATCCGAACAATTACAGCAAGTTCACTAATTGTAAAT
CACTCCTTATTAAACGACGAAGAATTCATATAGGGGAGAAACCCTACAACTGTGGAGAATGTGGTAAGGC
CCTTAGTTCTCATAAAACACTTTCTATACACCAGAGACTTCACACTGGAGACAAACCTTACAAGTGTGAA
GAGTGTCATAAAGCCTTCAGTACTCGCTCATCACTTTTTATACACATGAAAAATCATACTGATGAAAAAA
TCTACAAGTGTGAAGAATGTGGCAAAACATTTTACTATCCTTCAATGCTGAAGCAACATCAGAGAATTCA
TTCTGGGGAGAAACCTTGCAAGTGTGAAGAATGTGGAAAATCCTTTGGCTTTCCCTCATTCCTTAAGCAA
CATCAAAGAATTCATTGTAGAAAAAATGCCTACAAGGATGAAATATGTGTCAAAAGACTTTCCCCTCCTC
TACCCCTTCAGGAACATGAGCAAATCCATACTGAAGAGAAACCCTACAAGTGTGGAGAATGTTATAAAGC
CTTTCGTTATCACTCAGCCCTTAGGATACACAAGACAGTTCACACTGGAGAGAAACCTTACAAGTGTGAA
GAGTGTAGCAGATGCTTTTCCTCATCTTCCTGCCTTAAAAGACATCAAATACTTCACTCTGAAGACAACC
CATACAAGTGTGAAGAGTGTGGCAGATGTTTCTGCTCATCTTCATCTCTTAGACGACATCAAACATTTCA
TTCTGAAGACAATCCCTATAAATGTGAAGAATGTGACAAAAGGTTTTCATGTTCTGCAAGTCTTCAGGAG
CATCAAACAATTCATACTGGAGAGAAACCATACACGTGTGAAAATTGTCACAAAGCCTTTCGTTATCACT
CATCCCTTAGGAGACATAAGACAGTTCATACCAGAGAGAAATCCTACAAGTGTGAAAAGTGTCCTAGGGG
CTTTTCCTCATCCTCCTGCCTTGTAAGGCATCAAGCAATTCACTCTGAAGACAATCCACACAAGTGTGTG
GAATGTGGCAAAGCCTTTGTTAATGTTTATAGCCTGACTCGACACATGACAGTTCATGCTGGAGAGAAAT
CCTACAAAGGTCTTAAAACACTTATACTTCTTCAGTCCTTAAAAGACATCAACTAA

Translation (461 aa):
MEEMLSFWDVAIDFSPEEWECLEPAQWDLYRDVMLENFSHLVFLGLAVSKPFLVTFLEQRQGPWDMKRQA
AATVYPGIIPNDPNNYSKFTNCKSLLIKRRRIHIGEKPYNCGECGKALSSHKTLSIHQRLHTGDKPYKCE
ECHKAFSTRSSLFIHMKNHTDEKIYKCEECGKTFYYPSMLKQHQRIHSGEKPCKCEECGKSFGFPSFLKQ
HQRIHCRKNAYKDEICVKRLSPPLPLQEHEQIHTEEKPYKCGECYKAFRYHSALRIHKTVHTGEKPYKCE
ECSRCFSSSSCLKRHQILHSEDNPYKCEECGRCFCSSSSLRRHQTFHSEDNPYKCEECDKRFSCSASLQE
HQTIHTGEKPYTCENCHKAFRYHSSLRRHKTVHTREKSYKCEKCPRGFSSSSCLVRHQAIHSEDNPHKCV
ECGKAFVNVYSLTRHMTVHAGEKSYKGLKTLILLQSLKDIN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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