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Report for CCDS49439.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
49439.1 Public Mus musculus 14 Fam170b 23 108 98 CCDS HistoryNCBI Gene:105511Re-query CCDS DB by CCDS ID:49439.1Re-query CCDS DB by GeneID:105511See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 49439.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000104926.2 ENSMUSP00000100529.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000104926.2Link to Ensembl Protein Viewer:ENSMUSP00000100529.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000104926Re-query CCDS DB by Protein ID:ENSMUSP00000100529
Original member NCBI NM_001164485.1 NP_001157957.1 Updated not alive Link to Nucleotide Sequence:NM_001164485.1Link to Protein Sequence:NP_001157957.1Re-query CCDS DB by Nucleotide ID:NM_001164485Re-query CCDS DB by Protein ID:NP_001157957
Current member NCBI NM_001164485.2 NP_001157957.1 Accepted alive Link to Nucleotide Sequence:NM_001164485.2Link to Protein Sequence:NP_001157957.1Re-query CCDS DB by Nucleotide ID:NM_001164485Re-query CCDS DB by Protein ID:NP_001157957Link to BLAST:NP_001157957.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001157957.1 378 E9PXT9 378 100% 0 0

Chromosomal Locations for CCDS 49439.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 32834076 32834184 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 32835319 32836346 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1137 nt):
ATGAAACACCATCTCATTGAGCATAGGGGAGAACAGACACCTGGGACCGCCGTGGGCATGGCCAGCCCAG
ACGCCGCAGAGGAGAGCACAGGAGTGTGCTGGCCAGGTGGGGCCATGAGGAGGAATGAGTCATCTCCGCG
GCCAGGGCCTGCCTTCCTCCCTGACGATGACATCTACTTGGCAGCCCGGGCACAGGGGGTGCTGGGTTGG
AGCAGCTCTCCATCATCCCAGTCGTCCTCCGAGTATCAGTCCTACTCTCAGTACCAGTCCTGGGACTCCA
GCAAATCTGAGGAGCAGCAGGAGACTCCACCTGAGAGCGTGTGCGCCCTGTATACCCACGTGCAGACTGT
GCGCGGCGTGGCAGTGGCTTGGGAGACTGATGATGGCTTTGAGCCAGTCACCAGGAAGCCCCTTATCCGG
GAGGCTGAGTTCATCAAGCGTCAGCGGCGGAAAGGCTCCTCCTTTGAGATGGCCTCCAACACAGACCTGC
GCTGGGAGCTGGAAGACTGCAAGCACTACTGCCCGCAGACTGAGGACCCTGTGGACTGCTGCATGCAGGA
GCTACGAGCACCACCAGACTGGCTGGTCACCACCAACCATGGCTTGCGCTGTGTGGCCTGCTGCAGAGTC
TTCCCTACGCTGGAGGCTCTGCTGGACCACGCCCAGCATGGCATCCAAGATGGCTTCAGCTGCCAAATAT
TCTTCGAGGAGATGCTGGAAAGGAAGCGGACCCGGGATCAAAAGCAGGACCAACAGCCTGTAGAAGAGGA
GCAGAGCCTTTCGGACAGTAGTGAATGTACCAGGCTCCTAACCAAGGTGCTTCCCTGGCAGCAGCAGCCG
CAGCAGCAGCCGCAGGAGCAACAGAAGCAGCAGCAGCAGCAACAGCAGAAGCAGCGGCAGCAGGAGCAGC
AGCAACATCAACAGCAGCAGCAGCAGCCGCAGCCACTGAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCC
ATTGCAGCCGCAGCCACTGAAGCAGCAGCCGTTGCAGCCGTTGCAGCCGCAGCCGCAGCCACAGCCACAG
AAGCAGCAGCAAAGGCAGCAGCAGAGGCAGCAGCAGCCACCGCGACAGCAGCAGAAACAACAGCCACTGC
AGCAACAGGGAAAGTAG

Translation (378 aa):
MKHHLIEHRGEQTPGTAVGMASPDAAEESTGVCWPGGAMRRNESSPRPGPAFLPDDDIYLAARAQGVLGW
SSSPSSQSSSEYQSYSQYQSWDSSKSEEQQETPPESVCALYTHVQTVRGVAVAWETDDGFEPVTRKPLIR
EAEFIKRQRRKGSSFEMASNTDLRWELEDCKHYCPQTEDPVDCCMQELRAPPDWLVTTNHGLRCVACCRV
FPTLEALLDHAQHGIQDGFSCQIFFEEMLERKRTRDQKQDQQPVEEEQSLSDSSECTRLLTKVLPWQQQP
QQQPQEQQKQQQQQQQKQRQQEQQQHQQQQQQPQPLKQQQQQQQQQPLQPQPLKQQPLQPLQPQPQPQPQ
KQQQRQQQRQQQPPRQQQKQQPLQQQGK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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