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Report for CCDS49462.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
49462.1 Public Mus musculus 14 BC061237 23 108 98 CCDS HistoryNCBI Gene:385138Re-query CCDS DB by CCDS ID:49462.1Re-query CCDS DB by GeneID:385138See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 49462.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000096899.2 ENSMUSP00000094662.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000096899.2Link to Ensembl Protein Viewer:ENSMUSP00000094662.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000096899Re-query CCDS DB by Protein ID:ENSMUSP00000094662
Original member Current member NCBI NM_198677.1 NP_941079.1 Accepted alive Link to Nucleotide Sequence:NM_198677.1Link to Protein Sequence:NP_941079.1Re-query CCDS DB by Nucleotide ID:NM_198677Re-query CCDS DB by Protein ID:NP_941079Link to BLAST:NP_941079.1

Chromosomal Locations for CCDS 49462.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 44500182 44500197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 44501162 44501318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 44503318 44503449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 44504107 44504291 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 44505997 44506061 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (555 nt):
ATGGGTTCCCAAGCAGGGTCATTTAGGAAGGCATCACCCCAAACTCCCAACATCAATGAGAACGAGAAAA
GAATCAAGAGGTTGGAGAAGCTCAAAAGAGATCTCCAGAACATTAAAAATGAGAGAGACGAACTCCAGGG
AATCCTGGCCAAGTACAAGGATTTGAATGACAGGATCAACTTTGAGACATTCATGCTTGAGATGCAACAT
AACCAGGTGATGACTGACCTGAAGAGAATGCCCCAGGACATCAGTGAGGCCTTGTACAAGTACAAGCAGT
TGACCACAGAAAATCAGTTCTACTGCTGCAGGAACTGCCACCTCCTGATTGAATCTAAGCTCATCCAGCA
CAAAGTCAGGATATTGTGGAAGGAGAACAGACAGCTGCTAAGGGAGCAGATTGCATCGGAAGAATGCAAC
ATAAAAACAAAAATACTATGTAAAGAAGGCAGCCAGAAGATCAAAGACAAATATAGCAGGCAATCAGCAG
GAAAACAAATAATTGTGGTTCCTGGAAGTAAGGCGGAGGCTGCTATGTCAAATCCATGTGCCTGA

Translation (184 aa):
MGSQAGSFRKASPQTPNINENEKRIKRLEKLKRDLQNIKNERDELQGILAKYKDLNDRINFETFMLEMQH
NQVMTDLKRMPQDISEALYKYKQLTTENQFYCCRNCHLLIESKLIQHKVRILWKENRQLLREQIASEECN
IKTKILCKEGSQKIKDKYSRQSAGKQIIVVPGSKAEAAMSNPCA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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