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Report for CCDS49466.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
49466.1 Public Mus musculus 14 Cdkn3 23 108 98 CCDS HistoryNCBI Gene:72391Re-query CCDS DB by CCDS ID:49466.1Re-query CCDS DB by GeneID:72391See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 49466.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000067426.5 ENSMUSP00000070575.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000067426.5Link to Ensembl Protein Viewer:ENSMUSP00000070575.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000067426Re-query CCDS DB by Protein ID:ENSMUSP00000070575
Original member Current member NCBI NM_028222.2 NP_082498.1 Accepted alive Link to Nucleotide Sequence:NM_028222.2Link to Protein Sequence:NP_082498.1Re-query CCDS DB by Nucleotide ID:NM_028222Re-query CCDS DB by Protein ID:NP_082498Link to BLAST:NP_082498.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_082498.1 211 Q810P3 211 100% 0 0

Chromosomal Locations for CCDS 49466.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 46760640 46760648 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 46762528 46762610 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 46764524 46764579 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 46764996 46765040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 46767176 46767398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 46768866 46768897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 46769836 46769936 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 46771401 46771487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (636 nt):
ATGAAGCCGCCCATTTCAATACAAGCAAGTGAGTTTGATTCTTCAGACGAAGAACCTGTTGATGAAGAAC
AGACTCCAATTCAAATTTCATGGCTACCTCTGTCGCGAGTGAATTGTTCCCAGTTTCTCGGTTTATGTGC
TCTTCCAGGTTGTAAGTTTAAAGATGTTAGAAGAAATATTCAGAAAGATACAGAAGAACTAAAGAGCTAC
GGGATCCAAGACGTGTTTGTTTTCTGCACCAGAGGGGAGCTGTCAAAATATAGAGTCCCAAACCTTCTGG
ACCTCTACCAACAATATGGAATTGTCACCCATCATCATCCGATCCCAGATGGAGGGACTCCCGACATTGG
CAGCTGCTGGGAAATCATGGAGGAGCTGGCCACCTGCCTCAAAAACAACCGGAAAACCCTGATACATTGT
TACGGAGGACTTGGAAGATCCTGTCTTGCTGCTTGTCTCCTCCTATACTTGTCTGACTCAATCTCACCAC
AGCAAGCCATAGACAGCCTTCGAGATGTCAGAGGATCTGGGGCGATACAGACCATCAAGCAATATAACTA
TCTTCATGAATTCCGGGATAAATTAGCTGCGTATCTATCATCAAGAGATTCACTATCAAGATCTGTGTCC
AGATAA

Translation (211 aa):
MKPPISIQASEFDSSDEEPVDEEQTPIQISWLPLSRVNCSQFLGLCALPGCKFKDVRRNIQKDTEELKSY
GIQDVFVFCTRGELSKYRVPNLLDLYQQYGIVTHHHPIPDGGTPDIGSCWEIMEELATCLKNNRKTLIHC
YGGLGRSCLAACLLLYLSDSISPQQAIDSLRDVRGSGAIQTIKQYNYLHEFRDKLAAYLSSRDSLSRSVS
R


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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