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Report for CCDS49491.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
49491.1 Public Mus musculus 14 Psmb11 23 108 98 CCDS HistoryNCBI Gene:73902Re-query CCDS DB by CCDS ID:49491.1Re-query CCDS DB by GeneID:73902See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 49491.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000097177.4 ENSMUSP00000132140.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000097177.4Link to Ensembl Protein Viewer:ENSMUSP00000132140.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000097177Re-query CCDS DB by Protein ID:ENSMUSP00000132140
Original member Current member NCBI NM_175204.4 NP_780413.1 Accepted alive Link to Nucleotide Sequence:NM_175204.4Link to Protein Sequence:NP_780413.1Re-query CCDS DB by Nucleotide ID:NM_175204Re-query CCDS DB by Protein ID:NP_780413Link to BLAST:NP_780413.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_780413.1 302 Q8BG41 302 100% 0 0

Chromosomal Locations for CCDS 49491.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 54625327 54626235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (909 nt):
ATGGCTCTTCAGGATGTGTGCAAGTGGCAGACTCCCGACACTCCCAGACCATCCATTCACTTGCCTCAGG
CCGGTGGCTGGGCTGTACCCCGGGGCTGTGACCCTCAAACCTTCCTGCAGATCCATGGCCCCAGGCTGGC
TCATGGCACCACTACCCTGGCTTTTCGCTTTCGTCACGGTGTCATCGCTGCGGCTGATACTCGGTCCTCC
TGTGGCAGCTATGTGGCATGTCCAGCCTCACGGAAGGTCATTCCTGTGCACCAGCGTCTCCTGGGTACCA
CCTCTGGGACCTCTGCTGACTGTGCCACATGGTACCGGGTGCTACGGCGGGAGCTGCGGCTTCGGGAACT
GAGGGAAGGCCAGCTGCCCAGTGTGGCAGGCACGGCCAAACTCTTGGCAGCTATGATGTCCTGCTACCGC
GGTCTGGATCTGTGTGTGGCCACTGCCCTCTGTGGCTGGGACCACTCTGGCCCTGCTCTCTTCTATGTCT
ACAGCGATGGCACTTGTCTGCAGGGAGATATCTTCTCAGTAGGCTCTGGGTCTCCCTACGCCTATGGTGT
GCTTGATCGTGGCTACCACTATGACATGACCATCCAGGAAGCCTACACCCTGGCCCGCTGTGCTGTGGCC
CATGCCACCCACCGTGATGCTTATTCAGGGGGCTCAGTGGACCTCTTCCACGTTCGGGAGAGCGGATGGG
AGTATGTATCCCGCAGTGATGCTTGCGTGCTGTATAGGGAGCTGCAGAAAGCCCGGAGCTTGGAGCAGGA
GCTGGAGGCAAAAGCTTGTGGAATCTATCCTGAGCCTGCCACGCCGCAAGGTGCTCGAGAATGTAAAGAA
CTCTTTGTGGAGCAAGAGGAGGTGACGCCAGAAGACTGCGCGATAATAATGAAGACTGAAACAATGTAA

Translation (302 aa):
MALQDVCKWQTPDTPRPSIHLPQAGGWAVPRGCDPQTFLQIHGPRLAHGTTTLAFRFRHGVIAAADTRSS
CGSYVACPASRKVIPVHQRLLGTTSGTSADCATWYRVLRRELRLRELREGQLPSVAGTAKLLAAMMSCYR
GLDLCVATALCGWDHSGPALFYVYSDGTCLQGDIFSVGSGSPYAYGVLDRGYHYDMTIQEAYTLARCAVA
HATHRDAYSGGSVDLFHVRESGWEYVSRSDACVLYRELQKARSLEQELEAKACGIYPEPATPQGARECKE
LFVEQEEVTPEDCAIIMKTETM


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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