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Report for CCDS49695.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
49695.1 Public Mus musculus 15 Panx2 23 108 98 CCDS HistoryNCBI Gene:406218Re-query CCDS DB by CCDS ID:49695.1Re-query CCDS DB by GeneID:406218See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 49695.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000162424.1 ENSMUSP00000124354.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000162424.1Link to Ensembl Protein Viewer:ENSMUSP00000124354.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000162424Re-query CCDS DB by Protein ID:ENSMUSP00000124354
Original member Current member NCBI NM_001002005.2 NP_001002005.2 Accepted alive Link to Nucleotide Sequence:NM_001002005.2Link to Protein Sequence:NP_001002005.2Re-query CCDS DB by Nucleotide ID:NM_001002005Re-query CCDS DB by Protein ID:NP_001002005Link to BLAST:NP_001002005.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001002005.2 677 Q6IMP4-1 677 100% 0 0

Chromosomal Locations for CCDS 49695.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 89060074 89060299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89067558 89069021 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89069534 89069877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2034 nt):
ATGCACCACCTCCTGGAGCAGTCGGCGGACATGGCGACCGCGCTGCTGGCGGGCGAGAAGCTGAGGGAGC
TGATCCTGCCTGGCTCGCAGGACGACAAGGCGGGCGCGCTGGCCGCGCTGCTGCTGCAGCTCAAGCTGGA
ACTGCCGTTCGACCGCGTGGTCACCATCGGCACCGTGCTGGTACCCATCCTGCTGGTCACCCTGGTCTTC
ACCAAGAACTTCGCAGAGGAACCAATTTACTGTTATACTCCGCACAACTTCACCCGTGATCAGGCGCTGT
ACGCCCGCGGCTACTGCTGGACAGAGCTGCGGGACGCGCTGCCCGGCGTGGATGCCAGCCTCTGGCCATC
GTTGTTTGAGCACAAGTTCCTGCCCTACGCGCTGCTGGCCTTTGCCGCCATCATGTATGTGCCCGCGCTG
GGCTGGGAGTTCCTCGCCTCCACGCGCCTCACCTCGGAGCTCAACTTCCTTCTTCAGGAGATCGACAACT
GCTACCACCGAGCGGCCGAAGGTCGCGCACCCAAGATTGAGAAGCAGATCCAGTCCAAGGGGCCCGGCAT
CACGGAGCGCGAGAAGCGAGAGATCATTGAGAACGCCGAGAAGGAGAAGAGCCCGGAGCAGAATCTGTTT
GAGAAGTACCTGGAACGCCGGGGCCGCAGCAACTTCCTGGCCAAGCTGTACTTGGCACGGCACGTCCTGA
TCCTGCTGCTCAGCGTGGTGCCCATCTCCTACCTATGCACATACTACGCCACCCAGAAGCAGAACGAGTT
CACCTGTGCCCTGGGCGCCTCACCTGACGGGCCGGTGGGTAGCGCTGGGCCCACGGTGCGCGTCAGCTGT
AAGCTACCGTCTGTGCAGCTGCAGCGGATCATTGCAGGTGTGGACATCGTCTTGCTCTGCTTCATGAACC
TCATCATCCTAGTCAACCTCATCCACCTCTTCATCTTCCGCAAGAGCAACTTCATCTTCGACAAACTAAA
CAAGGTGGGTATCAAGACGCGCCGGCAGTGGCGCCGCTCGCAGTTCTGCGACATCAACATCCTGGCCATG
TTCTGTAACGAGAACCGCGACCACATCAAGTCGCTGAACCGGCTGGACTTCATCACCAACGAGAGCGACC
TCATGTACGACAATGTGGTGCGGCAGCTTCTGGCTGCCTTGGCTCAGTCTAACCACGACACCACGCCCAC
TGTGCGGGACTCTGGCATCCAGACCGTGGACCCCAGCATCAACCCTGCGGAGCCTGATGGTTCTGCTGAG
CCACCCGTGGTCAAGCGGCCCCGTAAGAAAATGAAGTGGATCCCCACCAGCAACCCGCTGCCACAGCCCT
TCAAGGAGCAGCTGGCCATTATGCGCGTGGAAAACAGCAAGACTGAGAAGCCCAAGCCCGTGCGCAGGAA
GACAGCCACAGACACACTTATTGCCCCGCTGCTGGACGCTGGTGCCCGTGCTGCCCACCACTACAAGGGC
AGTGGAGGTGATTCAGGCCCCTCCTCTGCCCCGCCTGCTGCCTCTGAGAAAAAGCATACCCGCCACTTCT
CCTTGGACGTGCATCCCTATATCCTAGGTACCAAGAAGGCCAAGACTGAGGCGGTACCCCCTGCCCTACC
AGCCTCCCGCAGCCAAGAAGGTGGCTTCCTGTCCCAGACAGAGGAATGTGGGCTGGGCCTAGCTGCAGCA
CCCACCAAAGATGCTCCACTCCCCGAGAAGGAAATCCCGTACCCCACAGAGCCTGCCCTGCCAGGGCTCC
CATCTGGGGGATCATTCCATGTCTGCTCACCCCCCGCAGCCCCCGCCGCTGCTTCCCTGTCACCAGGCAG
TCTGGGCAAGGCTGACCCTCTCACCATCCTGAGCCGGAACGCCACTCACCCCCTGCTCCACATCAGCACG
CTGTATGAGGCCCGGGAAGAGGAGGAAGGAGGCCCCTGTGCCCCCTCAGACATGGGCGACCTCCTCAGCA
TACCCCCGCCCCAGCAGATCCTCATCGCCACCTTCGAGGAGCCGAGAACAGTTGTGAGTACTGTGGAGTT
TTGA

Translation (677 aa):
MHHLLEQSADMATALLAGEKLRELILPGSQDDKAGALAALLLQLKLELPFDRVVTIGTVLVPILLVTLVF
TKNFAEEPIYCYTPHNFTRDQALYARGYCWTELRDALPGVDASLWPSLFEHKFLPYALLAFAAIMYVPAL
GWEFLASTRLTSELNFLLQEIDNCYHRAAEGRAPKIEKQIQSKGPGITEREKREIIENAEKEKSPEQNLF
EKYLERRGRSNFLAKLYLARHVLILLLSVVPISYLCTYYATQKQNEFTCALGASPDGPVGSAGPTVRVSC
KLPSVQLQRIIAGVDIVLLCFMNLIILVNLIHLFIFRKSNFIFDKLNKVGIKTRRQWRRSQFCDINILAM
FCNENRDHIKSLNRLDFITNESDLMYDNVVRQLLAALAQSNHDTTPTVRDSGIQTVDPSINPAEPDGSAE
PPVVKRPRKKMKWIPTSNPLPQPFKEQLAIMRVENSKTEKPKPVRRKTATDTLIAPLLDAGARAAHHYKG
SGGDSGPSSAPPAASEKKHTRHFSLDVHPYILGTKKAKTEAVPPALPASRSQEGGFLSQTEECGLGLAAA
PTKDAPLPEKEIPYPTEPALPGLPSGGSFHVCSPPAAPAAASLSPGSLGKADPLTILSRNATHPLLHIST
LYEAREEEEGGPCAPSDMGDLLSIPPPQQILIATFEEPRTVVSTVEF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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